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Candida albicans WU-BLAST2 Search

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This form allows BLAST searches of Candida albicans sequence datasets. To search multiple fungal sequences, go to the Fungal BLAST search form at SGD.

Query Comment (optional, will be added to output for your use):

NOTE: If the input sequence is less than 30 letters you should change the default Cutoff Score value to something less than 100 or you can miss matches.

or

Upload Local TEXT File: FASTA, GCG, and RAW sequence formats are okay
WORD Documents do not work unless saved as TEXT.

Type or Paste a Query Sequence : (FASTA or RAW format, or No Comments, Numbers are okay)

Choose the Appropriate BLAST Program:

Choose a Sequence Database. All datasets contain only Candida albicans sequences.
Assembly 20 Advisory


or

Options: For descriptions of BLAST options and parameters, refer to the BLAST documentation at NCBI.

Output format :
Comparison Matrix :
Cutoff Score (S value) :
Word Length (W value) :  Default = 11 for BLASTN, 3 for all others
Expect threshold (E threshold) :
Number of best alignments to show :
Filter options :On Off  DUST file for BLASTN, SEG filter for all others
Query translation table :  For BLASTX and TBLASTX. Default is based on translation table used for BLAST database.

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