Index of /download/gff/C_glabrata_CBS138

Icon  Name                                                                            Last modified      Size  Description
[DIR] Parent Directory                                                                                     -   
[TXT] C_glabrata_CBS138_version_s02-m01-r17_features.gff                              13-May-2012 07:00  2.4M  
[   ] C_glabrata_CBS138_version_s02-m01-r17_features_with_chromosome_sequences.gff.gz 13-May-2012 07:00  3.9M  
[TXT] C_glabrata_CBS138_version_s02-m01-r17_intergenic.gff                            13-May-2012 07:10  1.1M  
[DIR] archive/                                                                        16-May-2012 15:30    -   

This directory contains the downloadable CGD files in the Generic
Feature Format (GFF).  These files describe features in CGD, including 
chromosomes, ORFs, CDSs, introns, sequence gaps, intergenic regions, etc.

Please see http://song.sourceforge.net/gff3.shtml for a detailed description 
of the Generic Feature Format (GFF).

The file
C_glabrata_CBS138_version_sXX-mYY-rZZ_features.gff contains the
current CGD annotation of the C. glabrata genome sequence.
The notation "sXX-mYY-rZZ" in the filename indicates the genome 
version to which the data in the file corresponds. It is based
on the versioning system used by AspGD for A. nidulans, which is described 
in detail at:
http://www.aspgd.org/help/SequenceHelp.shtml#Anids_versions 

The file 
C_glabrata_CBS138_version_sXX-mYY-rZZ_features_with_chromosome_sequences.gff.gz 
contains the current CGD annotation and the current genomic sequence
of all chromosomes of the genome sequence. The CGD annotations in 
this file and the C_glabrata_CBS138_version_sXX-mYY-rZZ_features.gff file
above are the same. The chromosome sequences are specified 
in the "##FASTA" section at the end of this file according to GFF3 file format 
specifications (see http://song.sourceforge.net/gff3.shtml). The notation 
"sXX-mYY-rZZ" in the filename indicates the genome 
version to which the data in the file corresponds. This file is updated weekly.

The file
C_glabrata_CBS138_version_sXX-mYY-rZZ_intergenic.gff 
lists the intergenic regions between 
coding regions in the chromosomes. This file also contains 
lengths of these intergenic sequences and GC and AT content of each 
intergenic region (percent GC and percent AT).
The notation "sXX-mYY-rZZ" in the filename indicates the genome 
version to which the data in the file corresponds.