Stress		HS		HS		HS		HS		OS		OS		OS		OS		XS		XS		XS		XS								
Time (min)		0		10		30		60		0		10		30		60		0		10		30		60								
Systematic	Common	Normalized	t-test	Normalized	t-test	Normalized	t-test	Normalized	t-test	Normalized	t-test	Normalized	t-test	Normalized	t-test	Normalized	t-test	Normalized	t-test	Normalized	t-test	Normalized	t-test	Normalized	t-test	Synonyms	Description	Product	S.cerevisiae homolog	S. cerevisiae gene function	Blast E-value	Keywords
Contig4-3074_0008	orf6.7805	1.000	0.998	0.575	0.238	0.586	0.049	0.681	0.154																	orf6.7805						
Contig4-3065_0027	YOR311	0.997	0.976	0.522	0.103	0.656	0.175	0.649	0.089																	orf6.5984;YOR311	YOR311C;HSD1	-	YOR311C		2.00E-51	"endoplasmic reticulum membrane, integral protein;integral membrane protein;molecular_function unknown;biological_process unknown"
Contig4-3084_0003	YBL64	0.992	0.960	0.585	0.056	0.607	0.081	0.624	0.015									0.813	0.697	1.428	0.405	1.260	0.512	1.451	0.192	orf6.3501;orf6.2885;YBL64;MTX4;CAX6;CAX5		rehydrin				
Contig4-2010_0007	RPP1	1.000	no replicates	0.450	no replicates	0.883	no replicates	0.800	no replicates	0.995	0.984	0.934	0.608	0.769	0.042	1.085	0.397									orf6.3222;RPP1	YHR062C;RPP1	nuclear ribonuclease P	YHR062C	Protein subunit of nuclear ribonuclease P (RNase P)	1.00E-28	ribonuclease MRP;ribonuclease P;ribonuclease MRP;ribonuclease P;rRNA processing;tRNA processing
Contig4-1537_0003	orf6.561	1.000	0.991	0.605	0.166	0.739	0.273	0.784	0.182									0.921	0.811	2.022	0.072	1.724	0.032	1.520	0.134	orf6.561	(U20390) ORF494 [Saccharomyces cerevisiae	Anchor protein. Mediates attachment of autophagosomes to microtubules.	YNL223W	Anchor protein. Mediates attachment of autophagosomes to microtubules.	8.00E-48	microtubule associated protein;microtubule binding;autophagy;autophagy;protein-vacuolar targeting
Contig4-2013_0010	YKL78	1.000	no replicates	0.280	no replicates	0.534	no replicates	0.445	no replicates	0.960	0.744	0.698	0.226	0.760	0.326	0.961	0.747									orf6.2510;orf6.2569;orf6.2511;orf6.2568;YKL78	YKL078W	RNA helicase	YKL078W	probable ATP-dependent RNA helicase	1.00E-180	biological_process unknown
Contig4-3104_0034	PHO5	0.986	0.946	0.537	0.079	0.891	0.539	1.081	0.382									0.998	0.968	1.186	0.351	1.638	0.053	1.484	0.129	orf6.7883;PHO5	YAR071W;pho11	acid phosphatase	YAR071W	"Acid phosphatase, secreted"	1.00E-99	extracellular;periplasmic space (sensu Fungi);acid phosphatase;biological_process unknown
Contig4-1879_0001	orf6.6858	0.980	0.901	0.575	0.018	0.863	0.225	0.886	0.681	1.073	0.547	0.775	0.214	0.939	0.743	0.218	0.431	0.940	0.824	0.922	0.150	0.726	0.372	0.866	0.271	orf6.6858	YLR099C;ICT1	Increased Copper Tolerance\; Similar to Ecm18p	YLR099C	Increased Copper Tolerance\; Similar to Ecm18p	2.00E-04	molecular_function unknown
Contig4-2861_0009	orf6.4146	0.977	0.892	0.771	0.331	0.440	0.009	0.632	0.165	1.044	0.554	0.852	0.220	0.856	0.637	0.622	0.201	0.966	0.875	0.932	0.579	0.959	0.381	0.978	0.812	orf6.4146;orf6.3035	YIL129C;TAO3	Transcriptional Activator of OCH1	YIL129C	Transcriptional Activator of OCH1	3.00E-05	molecular_function unknown
Contig4-2918_0013	ZPR1	0.992	0.959	0.599	0.053	0.883	0.335	0.858	0.258									0.997	0.962	0.759	0.016	0.785	0.294	0.740	0.198	orf6.7195;ZPR1	(AF019768) zinc finger protein [Schizosaccharomyces pombe	zinc finger protein	YGR211W	zinc finger protein	1.00E-180	"cytoplasm;nucleolus;transcription, from Pol I promoter"
Contig4-3011_0008	orf6.4209	0.996	0.955	0.617	0.018	0.670	0.067	0.660	0.112	1.139	0.525	1.152	0.304	0.815	0.104	0.866	0.074	0.921	0.806	0.997	0.980	1.001	0.995	0.919	0.611	orf6.4209	YCL008C;stp22	homologous to mouse and human Tsg101 tumor susceptibility genes	YCL008C	homologous to mouse and human Tsg101 tumor susceptibility genes	5.00E-08	molecular_function unknown
Contig4-2869_0015	YIL129	0.956	0.857	0.493	0.023	0.622	0.064	0.592	0.081	1.090	0.517	0.989	0.967	0.895	0.381	0.943	0.672	0.976	0.890	1.009	0.960	1.293	0.112	1.330	0.112	orf6.3035;YIL129	Tao3p >gi:731871:sp:P40468:YIM9_YEAST HYPOTHETICAL 269.9 KD	-	YIL129C	Transcriptional Activator of OCH1	3.00E-55	molecular_function unknown
Contig4-1906_0002	orf6.6147	0.999	0.981	0.574	0.010	0.656	0.007	0.682	0.068	0.907	0.424	1.140	0.661	0.973	0.907	1.050	0.743	0.982	0.905	1.097	0.148	1.048	0.687	1.051	0.797	orf6.6147						
Contig4-2200_0007	orf6.294	0.998	0.967	0.613	0.026	0.760	0.120	0.973	0.805	1.164	0.552	0.710	0.256	0.649	0.172	0.727	0.367	0.831	0.728	1.737	0.033	1.431	0.037	2.075	0.048	orf6.294						
Contig4-2571_0006	orf6.2904	0.992	0.959	0.597	0.103	0.890	0.443	1.032	0.312									0.988	0.922	0.583	0.065	0.431	0.036	0.592	0.091	orf6.2904;orf6.1406	YGR158C;MTR3	nucleolar protein involved in mRNA transport	YGR158C	nucleolar protein involved in mRNA transport	8.00E-04	cytoplasmic exosome (RNase complex);nuclear exosome (RNase complex);3'-5' exoribonuclease;35S primary transcript processing;mRNA catabolism
Contig4-2971_0013	YMR128	0.999	0.976	0.589	0.007	1.052	0.257	0.880	0.663	1.123	0.582	0.756	0.420	0.807	0.114	1.184	0.288	0.765	0.690	0.898	0.195	0.591	0.278	1.254	0.619	orf6.7465;YMR128	(S79915) Hls=155 kda putative DE-H type RNA-dependent ATPase	-	YMR128W	(putative) involved in cell wall biogenesis	1.00E-180	molecular_function unknown
Contig4-2287_0002	orf6.4888	0.998	0.973	0.494	0.018	0.404	0.004	0.290	0.004	0.982	0.775	0.624	0.101	1.019	0.863	0.878	0.453	0.991	0.932	1.117	0.423	1.228	0.226	1.281	0.351	orf6.4888;orf6.643;orf6.6959;orf6.426;orf6.1082						
Contig4-3097_0048	orf6.8097	0.997	0.960	0.460	0.060	0.684	0.087	0.671	0.427	0.996	0.983	0.596	0.518	0.653	0.032	1.382	0.054	0.935	0.824	0.792	0.148	1.087	0.617	1.060	0.819	orf6.8097	YLR002C		YLR002C		1.00E-130	molecular_function unknown;biological_process unknown
Contig4-1853_0004	MAK11	0.996	0.970	0.556	0.103	0.937	0.626	0.754	0.220									0.944	0.833	0.769	0.070	0.644	0.270	0.839	0.184	orf6.4370;MAK11	contains four beta-transducin repeats; Mak11p >gi:127111:sp	dsRNA replication	YKL021C	contains four beta-transducin repeats	8.00E-92	molecular_function unknown
Contig4-1929_0001	RPC34	0.997	0.974	0.426	0.157	0.973	0.831	0.823	0.615									0.964	0.863	0.489	0.053	0.496	0.057	0.736	0.012	orf6.5064;RPC34	(RNA polymerase III subunit	RNA polymerase III subunit	YNR003C	34-kDa subunit of RNA polymerase III (C)	5.00E-09	"DNA-directed RNA polymerase III;DNA-directed RNA polymerase III;transcription, from Pol III promoter"
Contig4-3092_0012	YNL191	0.996	0.953	0.726	0.155	0.483	0.019	0.406	0.004	0.899	0.528	1.622	0.292	0.853	0.681	0.949	0.825	0.982	0.903	1.140	0.317	1.317	0.221	1.494	0.220	orf6.6979;YNL191;YJL97;SPX45;SAP185;CAX26	YJL097W	-	YJL097W		3.00E-24	molecular_function unknown;biological_process unknown
Contig4-2204_0001	YDR496	0.972	0.885	0.351	0.065	0.592	0.043	0.726	0.385	0.961	0.584	0.602	0.038	0.726	0.099	1.037	0.377	1.000	0.985	1.456	0.120	1.474	0.373	1.155	0.504	orf6.4654;YDR496	(D13645) KIAA0020 [Homo sapiens	-	YDR496C		1.00E-143	molecular_function unknown;biological_process unknown
Contig4-3056_0010	orf6.5508	0.991	0.933	0.461	0.097	0.442	0.165	0.405	0.143	1.020	0.734	1.117	0.358	1.053	0.878	1.407	0.051	0.990	0.929	0.740	0.012	0.647	0.127	1.038	0.841	orf6.5508						
Contig4-2327_0006	orf6.3707	1.000	0.988	0.632	0.035	0.473	0.032	0.679	0.066	0.925	0.720	0.882	0.530	1.267	0.310	0.887	0.386	0.982	0.906	0.791	0.487	0.922	0.813	1.033	0.877	orf6.3707	YIL117C;PRM5	hydrophobic transmembrane domain	YIL117C	hydrophobic transmembrane domain	0.001	integral membrane protein;molecular_function unknown;mating (sensu Saccharomyces)
Contig4-2231_0001	orf6.7070	0.980	0.903	0.450	0.087	0.874	0.648	0.914	0.655	0.941	0.468	0.632	0.400	0.397	0.022	0.808	0.527	0.645	0.633	1.284	0.281	0.976	0.871	0.715	0.343	orf6.7070;orf6.7068	(D90827) Proliferating-cell nucleolar antigen P120 (Prolifer	"90-kDa protein, located in nucleolus, that is homologous to a human proliferation-associated nucleolar protein, p120"	YNL061W	"90-kDa protein, located in nucleolus, that is homologous to a human proliferation-associated nucleolar protein, p120"	1.00E-180	nucleolus;RNA methyltransferase;rRNA processing
Contig4-1786_0001	orf6.1723	0.992	0.936	0.516	0.002	0.697	0.127	1.024	0.663	1.029	0.928	0.747	0.267	1.435	0.123	1.034	0.585	0.993	0.943	1.380	0.017	0.962	0.906	1.331	0.314	orf6.1723;orf6.1724	(AL021811) putative protein [Arabidopsis thaliana		YDR531W		7.00E-43	molecular_function unknown;biological_process unknown
Contig4-2321_0007	YMR93	0.993	0.940	0.398	0.019	0.725	0.092	1.003	0.996	1.141	0.423	0.642	0.649	0.589	0.321	0.946	0.886	0.997	0.963	1.036	0.917	0.627	0.218	1.212	0.529	orf6.2465;YMR93	"(AL009196) /prediction=(method:''''genefinder'''', version:'"	-	YMR093W		9.00E-97	molecular_function unknown;biological_process unknown
Contig4-2550_0005	orf6.3490	0.969	0.874	0.476	0.004	0.674	0.080	0.696	0.146	0.912	0.435	0.525	0.024	0.708	0.348	0.774	0.098	0.997	0.964	0.619	0.024	0.560	0.075	0.793	0.178	orf6.3490	YJR076C;cdc11	Component of 10 nm filaments of mother-bud neck	YJR076C	Component of 10 nm filaments of mother-bud neck	1.00E-04	prospore membrane;septin ring (sensu Saccharomyces);shmoo;spore wall (sensu Fungi);structural protein of cytoskeleton;axial budding;cell shape and cell size control;cell wall organization and biogenesis;cell wall organization and biogenesis;cytokinesis;establishment of cell polarity (sensu Saccharomyces);mating (sensu Saccharomyces)
Contig4-2684_0001	orf6.4247	0.977	0.895	0.427	0.016	0.868	0.755	0.832	0.680	0.970	0.496	0.886	0.436	0.769	0.202	1.239	0.180	0.994	0.947	1.037	0.558	1.057	0.633	0.960	0.879	orf6.4247	YOR341W;rpa190	RNA polymerase I subunit 190 (alpha)	YOR341W	RNA polymerase I subunit 190 (alpha)	1.00E-180	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase I;transcription, from Pol I promoter"
Contig4-2654_0005	orf6.4373	0.980	0.900	0.525	0.064	0.593	0.072	0.608	0.043	0.867	0.428	0.717	0.186	0.723	0.052	0.660	0.080	0.955	0.847	0.942	0.382	0.755	0.216	1.306	0.295	orf6.4373	YGR222W;pet54	translational activator of cytochrome c oxidase subunit III	YGR222W	translational activator of cytochrome c oxidase subunit III	1.00E-04	mitochondrial inner membrane;mitochondrial matrix;molecular_function unknown;mRNA splicing;protein biosynthesis
Contig4-3040_0013	orf6.3060	0.999	0.978	0.548	0.013	1.045	0.764	1.523	0.028	0.946	0.590	0.669	0.098	0.550	0.032	0.934	0.331	0.997	0.958	0.794	0.496	0.942	0.738	0.772	0.230	orf6.3060	YOR274W;MOD5	transfer RNA isopentenyl transferase	YOR274W	transfer RNA isopentenyl transferase	3.00E-63	tRNA isopentenyltransferase
Contig4-3105_0041	AGP1	0.991	0.931	0.589	0.032	0.710	0.320	0.678	0.191	0.950	0.700	1.724	0.096	1.407	0.377	1.197	0.068	0.996	0.956	0.917	0.429	1.021	0.893	0.953	0.655	orf6.8914;orf6.8913;AGP1	YDR508C;GNP1	glutamine permease	YDR508C	high-affinity glutamine permease	1.00E-135	transport
Contig4-2913_0014	orf6.6720	0.967	0.868	0.525	0.016	0.665	0.195	0.703	0.148	0.929	0.423	0.815	0.381	0.674	0.010	0.800	0.340	0.995	0.947	1.016	0.873	0.789	0.123	0.718	0.083	orf6.6720	(AB002301) KIAA0303 [Homo sapiens	"cAMP-dependent protein kinase homolog, suppressor of cdc25ts"	YHR205W	"cAMP-dependent protein kinase homolog, suppressor of cdc25ts"	1.00E-180	protein serine/threonine kinase
Contig4-3094_0019	YIR12	0.964	0.870	0.388	0.133	0.843	0.299	0.606	0.495	1.012	0.938	0.961	0.926	0.655	0.270	1.150	0.207	0.997	0.961	1.397	0.307	0.727	0.263	1.206	0.147	orf6.7442;YIR12	YIR012W;SQT1	-	YIR012W	contains multiple WD repeats and interacts with Qsr1p in two hybrid	1.00E-100	cytosol;cytosolic ribosome;molecular_function unknown;ribosomal large subunit assembly and maintenance;ribosomal large subunit assembly and maintenance
Contig4-2109_0005	GAR1	0.913	0.796	0.370	0.018	0.965	0.902	0.541	0.180	1.124	0.461	1.840	0.158	1.370	0.525	1.880	0.039	0.975	0.885	0.793	0.169	0.889	0.062	0.755	0.321	orf6.1613;orf6.3445;GAR1	small nucleolar RNP proteins; Gar1p >gi:120941:sp:P28007:GAR	small nucleolar rnp protein	YHR089C	small nucleolar RNP proteins	7.00E-48	box H+ACA snoRNP protein;small nuclear ribonucleoprotein;35S primary transcript processing;rRNA modification
Contig4-2912_0007	ARP1	0.997	0.962	0.368	0.018	0.522	0.042	0.473	0.005	0.892	0.467	0.708	0.050	0.735	0.126	0.909	0.355	0.892	0.783	1.075	0.460	1.018	0.876	1.275	0.197	orf6.3822;ARP1	(D49829) actin [Pneumocystis carinii] >gi:2588918:dbj:BAA232	actin-related protein	YFL039C	Actin	1.00E-109	actin cable (sensu Saccharomyces);actin cortical patch (sensu Saccharomyces);actin filament;contractile ring (sensu Saccharomyces);structural protein of cytoskeleton;apical bud growth;apical bud growth;cell cycle dependent actin filament reorganization;cell cycle dependent actin filament reorganization;cell wall organization and biogenesis;cytokinesis;endocytosis;establishment of cell polarity (sensu Saccharomyces);exocytosis;isotropic bud growth;isotropic bud growth
Contig4-3106_0032	SUA5	0.972	0.880	0.440	0.076	0.854	0.268	0.736	0.391	1.077	0.423	0.903	0.874	0.633	0.001	1.083	0.706	0.989	0.925	0.791	0.055	0.765	0.325	0.726	0.038	orf6.8465;SUA5;PMR1	YGL169W;SUA5	translation initiation	YGL169W	translation initiation protein	1.00E-112	
Contig4-3098_0031	orf6.7785	0.994	0.946	0.730	0.088	0.471	0.064	0.505	0.060	0.940	0.471	0.661	0.244	2.359	0.002	1.126	0.518	1.000	0.994	0.620	0.012	1.002	0.990	0.851	0.127	orf6.7785						
Contig4-2764_0003	orf6.3273	0.999	0.977	0.596	0.026	0.742	0.340	0.777	0.021	0.896	0.431	0.976	0.756	0.923	0.694	0.995	0.951	0.971	0.877	1.251	0.150	0.844	0.322	0.858	0.388	orf6.3273	(AB027988) Hypothetical nuclear protein [Schizosaccharomyces	"DNA helicase homolog\; homolog of human XPBC, ERCC3"	YIL143C	"DNA helicase homolog\; homolog of human XPBC, ERCC3"	1.00E-180	"transcription factor TFIIH;DNA helicase;general RNA polymerase II transcription factor;mitotic repression of transcription, from Pol II promoter;transcription initiation, from Pol II promoter"
Contig4-2201_0002	orf6.5677	0.995	0.951	0.632	0.018	1.046	0.434	1.321	0.118	1.040	0.435	1.053	0.855	1.246	0.632	1.334	0.133	0.999	0.980	0.731	0.076	0.575	0.015	0.806	0.000	orf6.5677						
Contig4-2050_0001	YDR412	1.000	0.986	0.444	0.028	0.935	0.673	0.881	0.732	1.101	0.440	0.644	0.109	1.278	0.231	0.986	0.945	0.976	0.888	0.745	0.095	1.073	0.364	1.063	0.386	orf6.1521;YDR412	YDR412W	-	YDR412W		3.00E-32	cytoplasm;molecular_function unknown;biological_process unknown
Contig4-2653_0008	YLR221	0.959	0.855	0.355	0.014	0.630	0.039	0.866	0.327	1.203	0.424	1.393	0.365	0.970	0.935	1.452	0.005	0.977	0.895	0.525	0.053	0.458	0.001	0.594	0.014	orf6.1669;orf6.1014;orf6.1670;orf6.1015;YLR221	YLR221C	-	YLR221C		3.00E-11	molecular_function unknown;biological_process unknown
Contig4-3075_0006	orf6.7989	0.999	0.981	0.362	0.179	0.639	0.263	0.790	0.397	1.027	0.767	0.385	0.130	0.543	0.027	0.959	0.350	0.996	0.958	0.901	0.266	0.777	0.042	0.873	0.618	orf6.7989						
Contig4-2349_0003	orf6.3066	0.984	0.911	0.645	0.077	0.525	0.006	0.603	0.044	1.025	0.668	0.703	0.224	1.108	0.370	1.594	0.101	0.950	0.845	0.617	0.133	0.848	0.595	0.922	0.689	orf6.3066;orf6.758						
Contig4-2572_0007	orf6.1804	0.997	0.963	0.268	0.017	0.619	0.009	0.663	0.191	1.051	0.428	0.560	0.314	0.576	0.060	0.933	0.302	0.969	0.876	0.794	0.457	0.640	0.241	1.056	0.736	orf6.1804	YKL082C		YKL082C		2.00E-41	molecular_function unknown;biological_process unknown
Contig4-2750_0007		0.993	0.940	0.682	0.003	0.424	0.021	0.461	0.120	0.987	0.964	0.673	0.390	1.305	0.466	0.577	0.457	0.859	0.754	1.244	0.231	0.991	0.968	1.311	0.332							
Contig4-3077_0002	orf6.6309	0.999	0.984	0.924	0.731	0.471	0.057	0.927	0.086	1.022	0.512	0.820	0.149	0.790	0.073	0.924	0.062	0.997	0.963	1.118	0.605	0.717	0.108	0.898	0.409	orf6.6309;orf6.587	YPR147C		YPR147C		1.00E-20	molecular_function unknown;biological_process unknown
Contig4-1947_0002	orf6.1247	0.984	0.911	0.439	0.034	0.585	0.246	1.362	0.259	1.250	0.423	0.762	0.530	0.828	0.157	0.898	0.701	0.963	0.862	0.503	0.172	0.875	0.119	1.066	0.761	orf6.1247;orf6.143						
Contig4-2188_0004	orf6.4460	0.950	0.839	0.450	0.074	0.380	0.113	0.447	0.196	1.101	0.549	1.188	0.705	1.111	0.577	0.722	0.264	0.993	0.940	0.679	0.066	0.791	0.002	0.840	0.496	orf6.4460;orf6.745						
Contig4-2237_0004	orf6.3448	0.899	0.769	0.406	0.003	0.766	0.103	0.863	0.768	1.161	0.473	1.425	0.181	1.083	0.782	1.282	0.231	0.988	0.924	0.348	0.012	0.266	0.016	0.669	0.082	orf6.3448						
Contig4-2055_0002	ADE13	0.970	0.881	0.444	0.054	0.948	0.819	1.325	0.376	1.374	0.423	1.039	0.921	0.764	0.648	1.319	0.191	0.988	0.922	0.946	0.705	0.828	0.405	1.032	0.772	orf6.5841;orf6.551;ADE13	YLR359W;ADE13	adenylosuccinate lyase	YLR359W	Adenylosuccinate Lyase	1.00E-164	adenylosuccinate lyase
Contig4-2997_0017	orf6.6439	0.989	0.926	0.335	0.025	0.528	0.045	0.824	0.257	1.158	0.453	1.427	0.649	0.576	0.016	1.052	0.245	0.997	0.962	0.616	0.043	0.561	0.009	0.812	0.520	orf6.6439	(AL022599) WD repeat protein [Schizosaccharomyces pombe		YDR324C		1.00E-160	molecular_function unknown;biological_process unknown
Contig4-3044_0009	orf6.4911	0.899	0.768	0.383	0.012	0.746	0.581	0.841	0.743	1.013	0.478	0.855	0.258	0.676	0.094	0.894	0.569	0.978	0.894	0.511	0.063	0.465	0.120	0.940	0.685	orf6.4911	YNR053C		YNR053C		1.00E-114	nucleus;molecular_function unknown;biological_process unknown
Contig4-1693_0002	YBL64	0.973	0.881	0.447	0.014	0.481	0.016	0.436	0.102	1.004	0.966	1.186	0.549	1.190	0.629	0.815	0.528	0.982	0.904	0.900	0.358	1.107	0.631	1.167	0.624	orf6.2885;orf6.3501;YBL64;MTX4;CAX6;CAX5	(AL033396) questionable orf [Candida albicans	rehydrin				
Contig4-2266_0004	YOL41	0.987	0.919	0.152	0.002	0.499	0.041	0.619	0.190	0.804	0.423	0.443	0.198	0.383	0.040	0.868	0.182	0.994	0.943	0.553	0.176	0.627	0.232	0.921	0.408	orf6.6700;YOL41	(Z98529) putative RNA-binding protein [Schizosaccharomyces p	-	YOL041C	NucleOlar Protein\; isolated as a mutant exhibiting synthetic lethality with a nop2 ts allele.	1.00E-81	molecular_function unknown;biological_process unknown
Contig4-1879_0002	orf6.6859	0.977	0.891	0.390	0.007	0.560	0.028	0.921	0.891	1.028	0.426	0.604	0.206	0.701	0.058	1.067	0.355	0.995	0.951	1.257	0.316	0.746	0.027	0.837	0.244	orf6.6859	YHR196W		YHR196W		7.00E-04	molecular_function unknown;biological_process unknown
Contig4-2110_0005	orf6.6423	0.999	0.988	0.314	0.235	0.965	0.909	0.660	0.292									0.963	0.864	0.338	0.018	0.239	0.022	0.538	0.063	orf6.6423	"(AF128393) similar to beta-transducins (Pfam: PF00400, Score"		YLR409C		1.00E-180	molecular_function unknown;biological_process unknown
Contig4-3058_0013	RHO2	0.979	0.896	0.479	0.066	0.694	0.039	0.809	0.093	0.860	0.424	0.688	0.010	0.873	0.437	0.702	0.004	0.979	0.900	1.108	0.421	1.380	0.228	1.270	0.032	RHO2	YNL090W;RHO2	GTP-binding protein	YNL090W	GTP-binding protein of the rho subfamily	1.00E-18	intracellular;RHO small monomeric GTPase;signal transducer;cell wall organization and biogenesis;establishment of cell polarity (sensu Saccharomyces);microtubule-based process;small GTPase mediated signal transduction
Contig4-2919_0005	orf6.5541	0.992	0.937	0.351	0.000	0.594	0.033	0.709	0.002	1.040	0.611	0.493	0.060	0.568	0.002	0.923	0.133	0.999	0.976	0.822	0.119	0.835	0.220	1.023	0.881	orf6.5541;orf6.943	(AL031740) putative mitochondrial translation system compon	Mitochondrial membrane protein	YOR017W	Mitochondrial membrane protein	1.00E-44	mitochondrial membrane;RNA binding;RNA processing
Contig4-2539_0011	YDR365	0.990	0.930	0.470	0.019	0.870	0.482	1.192	0.738	1.018	0.709	0.570	0.149	0.582	0.092	0.786	0.202	0.913	0.799	1.256	0.327	0.759	0.484	1.567	0.246	orf6.504;orf6.5589;orf6.5590;orf6.505;YDR365	YDR365C	-	YDR365C		3.00E-90	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2965_0002	YBL64	0.978	0.895	0.537	0.030	0.579	0.074	0.544	0.174	0.922	0.539	1.194	0.059	1.141	0.585	1.107	0.384	0.927	0.819	1.236	0.148	1.354	0.198	1.750	0.074	orf6.3501;orf6.2885;YBL64;MTX4;CAX6;CAX5		rehydrin				
Contig4-1840_0001	orf6.1347	0.993	0.942	0.517	0.092	1.196	0.394	1.238	0.424	0.915	0.443	0.599	0.150	0.599	0.028	0.924	0.692	0.936	0.828	1.170	0.498	1.063	0.015	1.116	0.558	orf6.1347						
Contig4-2535_0006	orf6.2811	0.990	0.929	0.601	0.009	0.875	0.210	0.899	0.758	1.096	0.734	0.860	0.674	1.140	0.428	1.158	0.288	0.982	0.903	0.723	0.029	0.579	0.082	0.849	0.149	orf6.2811;orf6.3783						
Contig4-1844_0002	YOR252	0.952	0.851	0.197	0.014	0.490	0.161	0.726	0.132	0.955	0.767	0.629	0.577	0.743	0.302	0.947	0.560	0.839	0.730	1.378	0.411	1.123	0.465	1.332	0.394	orf6.1469;orf6.1470;YOR252	(-	-	YOR252W		6.00E-18	molecular_function unknown;biological_process unknown
Contig4-2865_0003	orf6.4798	0.989	0.924	0.369	0.006	0.903	0.295	0.899	0.375	0.956	0.462	0.666	0.287	0.587	0.003	1.199	0.082	0.998	0.969	0.578	0.204	0.767	0.065	0.933	0.654	orf6.4798;orf6.4799	(RNA polymerase II subunit	Net1-Associated Nucleolar protein 1	YPL126W	Net1-Associated Nucleolar protein 1	5.00E-81	molecular_function unknown;biological_process unknown
Contig4-1894_0003	orf6.1231	0.987	0.920	0.432	0.014	0.354	0.005	0.637	0.247	1.044	0.444	1.109	0.551	1.442	0.454	1.325	0.239	0.981	0.903	0.634	0.034	0.776	0.101	0.791	0.264	orf6.1231;orf6.1230;orf6.1232	(AJ223327) rAsp f 9 [Aspergillus fumigatus	Cell wall protein	YGR189C	Cell wall protein	6.00E-92	cell wall;molecular_function unknown;biological_process unknown
Contig4-2516_0008	YNL281	0.988	0.924	0.351	0.112	0.798	0.170	1.038	0.662	0.860	0.463	0.504	0.241	0.783	0.325	0.650	0.241	0.849	0.735	0.880	0.294	1.125	0.693	1.281	0.380	orf6.1808;YNL281;YLR144;YJL149;YHL8;YDR485;RPL32;CAX18;CAX17;CAX16;CAX15	YLR276C;DBP9	-	YLR276C	putative RNA helicase	1.00E-180	nucleolus;ATP dependent RNA helicase;35S primary transcript processing;ribosomal large subunit assembly and maintenance
Contig4-3096_0039	YDR101	0.995	0.947	0.292	0.064	0.544	0.029	0.645	0.337	1.089	0.478	0.769	0.559	0.502	0.044	1.083	0.182	0.941	0.831	1.284	0.126	0.983	0.928	0.255	0.487	orf6.7752;YDR101	YDR101C	-	YDR101C		1.00E-141	molecular_function unknown;biological_process unknown
Contig4-1872_0004	YCR16	0.989	0.928	0.451	0.038	0.780	0.247	0.926	0.797	1.141	0.477	1.228	0.313	0.957	0.655	1.169	0.474	0.974	0.890	0.844	0.105	0.581	0.034	0.707	0.064	orf6.6879;orf6.6877;YCR16	(-	-	YCR016W		2.00E-17	molecular_function unknown;biological_process unknown
Contig4-1777_0004	orf6.745	0.902	0.774	0.395	0.035	0.337	0.071	0.411	0.117	1.115	0.523	0.914	0.563	3.193	0.001	0.801	0.455	0.992	0.937	1.058	0.573	1.144	0.529	1.029	0.848	orf6.745;orf6.4460						
Contig4-2231_0002	GCD10	0.972	0.883	0.303	0.005	0.751	0.276	0.979	0.926	0.897	0.432	0.725	0.097	0.500	0.014	0.994	0.969	0.975	0.885	0.470	0.020	0.459	0.024	0.628	0.012	orf6.7071;GCD10	RNA-binding (zeta) subunit of translation initiation factor	translation initiation	YNL062C	RNA-binding (zeta) subunit of translation initiation factor 3 (eIF-3)	7.00E-90	ribosome;translation initiation factor;protein synthesis initiation
Contig4-1385_0002	MAK16	0.992	0.938	0.415	0.120	0.915	0.032	1.066	0.474	0.735	0.428	0.532	0.335	0.509	0.205	0.318	0.020	0.945	0.830	1.224	0.556	0.804	0.405	0.784	0.428	orf6.4657;MAK16	(nuclear protein	nuclear protein	YAL025C	putative nuclear protein	1.00E-19	molecular_function unknown
Contig4-2615_0006	SDS23	0.972	0.880	0.265	0.003	0.628	0.095	0.699	0.089	1.009	0.916	0.417	0.154	0.615	0.071	1.167	0.073	0.948	0.834	0.746	0.093	0.739	0.263	0.864	0.296	orf6.6344;SDS23;PLB97;OLE1;LTP1;CAX14;CAX13;DIP2	YLR129W;DIP2	spindle pole body protein	YLR129W	interacts with Dom3p	1.00E-180	biological_process unknown
Contig4-2742_0001	orf6.1715	1.000	0.984	0.648	0.009	1.307	0.025	0.902	0.771	1.160	0.462	0.468	0.222	0.764	0.390	0.931	0.610	0.952	0.840	0.662	0.028	0.595	0.056	1.019	0.734	orf6.1715	YER091C;met6	vitamin B12-(cobalamin)-independent isozyme of methionine synthase (also called N5-methyltetrahydrofolate homocysteine methyltransferase or 5-methyltetrahydropteroyl triglutamate homocysteine methyltransferase)	YER091C	vitamin B12-(cobalamin)-independent isozyme of methionine synthase (also called N5-methyltetrahydrofolate homocysteine methyltransferase or 5-methyltetrahydropteroyl triglutamate homocysteine methyltransferase)	1.00E-180	cytosol;5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase;methionine metabolism
Contig4-2883_0001	SMC1	0.991	0.931	0.663	0.024	0.508	0.024	0.666	0.017	0.993	0.945	0.667	0.160	1.198	0.301	0.913	0.438	0.995	0.951	0.920	0.388	0.985	0.868	1.170	0.238	orf6.2422;SMC1	(D30787) cut14 protein [Schizosaccharomyces pombe	chromosome segregation	YFL008W	SMC chromosomal ATPase family member	1.00E-180	cohesin;AT DNA binding;DNA secondary structure binding;adenosinetriphosphatase;adenosinetriphosphatase;double-stranded DNA binding;mitotic chromosome segregation
Contig4-2447_0016	HHO1	0.999	0.984	0.784	0.522	0.508	0.215	0.258	0.156																	HHO1	(histone H1	histone H1	YPL127C	histone H1	8.00E-05	
Contig4-3069_0016	YLR218	0.997	0.961	0.626	0.016	0.531	0.007	0.830	0.518	0.895	0.510	0.632	0.178	0.965	0.589	1.279	0.022	0.903	0.793	0.972	0.900	1.183	0.232	1.312	0.382	YLR218	YLR218C	-	YLR218C		3.00E-19	molecular_function unknown;biological_process unknown
Contig4-3056_0006		0.969	0.873	0.451	0.007	0.673	0.034	0.730	0.059	1.067	0.470	0.889	0.513	0.756	0.169	1.211	0.290	0.964	0.862	0.529	0.044	0.431	0.003	0.701	0.067		YLR363W-A		YLR363W-A		4.00E-06	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2134_0003	orf6.1060	0.992	0.936	0.486	0.001	0.498	0.001	0.649	0.121	0.959	0.467	0.790	0.483	0.915	0.262	0.952	0.692	0.981	0.906	0.847	0.376	0.827	0.149	1.050	0.690	orf6.1060						
Contig4-2791_0009	orf6.8276	1.000	0.992	0.309	0.007	0.754	0.183	0.754	0.254	0.990	0.432	0.654	0.345	0.420	0.036	1.233	0.219	0.986	0.915	0.829	0.511	0.603	0.020	0.822	0.235	orf6.8276	(AB001517) PWP2 protein [Homo sapiens	regulatory protein	YCR057C	regulatory protein	1.00E-180	cytoplasm;molecular_function unknown;cytokinesis;establishment of cell polarity (sensu Saccharomyces)
Contig4-3098_0049	PAB1	0.995	0.949	0.642	0.033	0.371	0.031	0.518	0.208	1.150	0.436	0.744	0.620	0.610	0.151	1.042	0.826	0.946	0.840	1.074	0.496	0.798	0.004	0.779	0.292	orf6.7774;PAB1	YER165W;PAB1	polyA-binding protein	YER165W	"Poly(A) binding protein, cytoplasmic and nuclear"	1.00E-180	
Contig4-2094_0002	orf6.6558	0.974	0.885	0.483	0.013	0.744	0.274	0.615	0.008	1.185	0.445	1.000	0.999	0.874	0.106	1.469	0.186	0.989	0.927	0.550	0.197	0.498	0.233	0.571	0.224	orf6.6558	YLR186W		YLR186W		1.00E-111	molecular_function unknown;biological_process unknown
Contig4-3004_0020	YKL155	0.992	0.935	0.472	0.013	1.253	0.031	1.417	0.254	1.042	0.427	0.648	0.463	0.674	0.200	1.118	0.450	0.994	0.945	0.612	0.032	0.687	0.345	0.625	0.198	orf6.3901;YKL155	Ykl155cp >gi:549729:sp:P36056:YKP5_YEAST HYPOTHETICAL 72.2 K	-	YKL155C		5.00E-68	mitochondrial small ribosomal subunit;structural protein of ribosome;protein biosynthesis
Contig4-3081_0007	orf6.1551	1.000	0.998	0.317	0.094	0.576	0.064	0.681	0.051	1.040	0.515	0.624	0.335	0.300	0.004	1.004	0.968	0.989	0.926	0.786	0.143	0.723	0.154	0.795	0.085	orf6.1551;orf6.1552	YMR290C;HAS1	Putative RNA-dependent helicase	YMR290C	Putative RNA-dependent helicase	1.00E-180	RNA helicase;biological_process unknown
Contig4-2883_0005	orf6.2425	0.993	0.943	0.397	0.024	0.666	0.091	0.915	0.512	0.910	0.432	0.393	0.254	0.439	0.024	0.962	0.716	0.964	0.868	0.781	0.372	0.844	0.643	0.778	0.297	orf6.2425	YLR336C;SGD1	may be involved in high osmolarity signaling pathway	YLR336C	may be involved in high osmolarity signaling pathway	0.001	
Contig4-2975_0006	orf6.4952	0.997	0.964	0.234	0.088	0.416	0.105	0.597	0.129	1.084	0.491	0.517	0.090	0.404	0.059	1.253	0.210	0.994	0.946	1.043	0.868	0.562	0.093	1.077	0.830	orf6.4952	(AL050019) hypothetical protein [Homo sapiens		YOR206W		1.00E-180	nucleus;molecular_function unknown;biological_process unknown
Contig4-3080_0023	orf6.8584	0.995	0.952	0.364	0.149	0.780	0.545	0.763	0.341	0.739	0.423	0.292	0.153	0.253	0.012	0.460	0.019	0.994	0.944	0.733	0.115	0.517	0.066	0.846	0.364	orf6.8584;orf6.8558	YER126C;KRE32		YER126C		1.00E-101	nucleus;molecular_function unknown;biological_process unknown
Contig4-3077_0001	YNL119	0.977	0.892	0.376	0.086	0.854	0.364	0.734	0.236	1.016	0.588	0.610	0.185	0.603	0.036	1.007	0.938	0.952	0.846	0.569	0.045	0.411	0.010	0.896	0.610	orf6.6308;YNL119	YNL119W	-	YNL119W		3.00E-56	molecular_function unknown;biological_process unknown
Contig4-2671_0010	FET96	0.970	0.880	0.536	0.020	0.497	0.311	0.590	0.324	1.032	0.472	0.955	0.845	1.332	0.305	0.952	0.808	0.904	0.790	0.730	0.050	0.560	0.122	0.856	0.339	orf6.5010;orf6.2939;orf6.790;orf6.5009;orf6.5008;FET96;FET3	YMR058W;FET3	FET3-like protein	YMR058W	multicopper oxidase	1.00E-167	plasma membrane;multicopper ferroxidase iron transport mediator;multicopper ferroxidase iron transport mediator;high affinity iron transport
Contig4-2648_0007	orf6.1133	0.993	0.941	0.201	0.014	0.700	0.045	0.740	0.080	1.024	0.508	0.893	0.696	0.754	0.048	1.057	0.744	0.995	0.948	0.674	0.004	0.343	0.037	0.794	0.255	orf6.1133;orf6.2592	YCR072C	regulatory protein	YCR072C	regulatory protein	4.00E-89	molecular_function unknown;biological_process unknown
Contig4-2841_0016	orf6.4006	0.971	0.878	0.430	0.002	0.719	0.045	0.852	0.454	0.935	0.430	1.367	0.160	0.433	0.184	0.991	0.723	0.981	0.902	0.333	0.034	0.887	0.503	0.754	0.063	orf6.4006	dicarboxylic amino acid permease; Dip5p >gi:1706439:sp:P5338	dicarboxylic amino acid permease	YPL265W	dicarboxylic amino acid permease	9.00E-58	transport
Contig4-2363_0001	orf6.888	0.999	0.977	0.594	0.019	0.729	0.243	0.699	0.244	0.813	0.424	2.415	0.004	1.384	0.107	0.598	0.108	0.979	0.895	1.000	0.998	1.326	0.077	0.992	0.964	orf6.888;orf6.2003						
Contig4-3073_0009	orf6.7836	0.963	0.869	0.463	0.025	0.992	0.955	0.962	0.387	0.979	0.517	0.424	0.094	0.485	0.053	0.993	0.956	0.988	0.925	0.839	0.371	0.730	0.219	0.927	0.746	orf6.7836						
Contig4-2874_0012	orf6.9132	0.995	0.948	0.337	0.002	0.533	0.037	0.600	0.041	1.077	0.527	0.548	0.465	0.794	0.186	0.912	0.215	1.000	0.986	0.735	0.156	0.614	0.100	0.785	0.323	orf6.9132	YBL028C		YBL028C		3.00E-11	molecular_function unknown;biological_process unknown
Contig4-2896_0003	RHR2	0.994	0.944	1.089	0.817	0.385	0.097	1.456	0.308	1.026	0.857	2.155	0.157	9.147	0.071	2.743	0.047	0.947	0.845	0.944	0.931	1.279	0.520	1.362	0.449	orf6.8673;RHR2	(glycerol-3-phosphatase	glycerol-3-phosphatase	YIL053W	DL-glycerol-3-phosphatase	1.00E-64	glycerol metabolism
Contig4-3104_0004	YMR310	1.000	0.997	0.278	0.006	0.504	0.073	0.726	0.376	1.037	0.443	0.432	0.197	0.640	0.008	0.957	0.696	0.966	0.870	0.735	0.408	0.724	0.331	1.371	0.316	orf6.3095;YMR310	YMR310C	-	YMR310C		1.00E-38	molecular_function unknown;biological_process unknown
Contig4-3105_0009	YML86	0.984	0.909	0.279	0.007	0.779	0.036	0.905	0.461	1.069	0.441	0.639	0.330	0.734	0.397	1.222	0.296	0.976	0.889	0.773	0.075	0.625	0.298	1.030	0.958	orf6.8900;YML86	YML093W	4-lactone oxidase	YML093W		1.00E-147	molecular_function unknown;biological_process unknown
Contig4-3070_0036	YOR4	1.000	0.987	0.333	0.011	0.639	0.036	0.789	0.036	1.042	0.672	0.551	0.270	0.544	0.004	1.234	0.212	0.991	0.932	0.721	0.160	0.647	0.116	1.096	0.489	orf6.1835;YOR4	YOR004W	-	YOR004W		2.00E-64	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2662_0008	YCF1	0.999	0.983	0.665	0.000	0.953	0.826	0.856	0.128	0.950	0.781	1.176	0.500	1.263	0.336	1.016	0.855	0.999	0.980	0.946	0.820	1.027	0.692	1.072	0.430	orf6.4035;YCF1	YLL015W;BPT1	metal resistance protein	YLL015W	ABC-type transmembrane transporter\; highly homologous to human MRP1 and to C. elegans mrp-1	2.00E-36	cellular_component unknown;bilirubin transporter;bilirubin transporter;bilirubin transport;bilirubin transport
Contig4-2995_0014	SAC7	0.998	0.970	0.769	0.119	0.529	0.016	0.620	0.029	1.057	0.493	0.911	0.641	0.807	0.035	1.003	0.987	0.964	0.864	0.657	0.364	0.555	0.058	0.681	0.145	orf6.8438;orf6.8436;SAC7	GTPase activating protein (GAP) for RHO1; Sac7p >gi:2133114	actin assembly	YDR389W	GTPase activating protein (GAP) for RHO1	1.00E-64	intracellular;RHO GTPase activator;signal transducer;cell cycle dependent actin filament reorganization;small GTPase mediated signal transduction
Contig4-2673_0001	HCA4	0.987	0.920	0.231	0.015	0.679	0.229	0.960	0.735	1.151	0.445	0.590	0.369	0.873	0.199	1.703	0.003	0.995	0.949	0.640	0.003	0.369	0.003	0.758	0.044	orf6.2728;HCA4	YJL033W;HCA4	helicase	YJL033W	putative RNA helicase	1.00E-155	nucleolus;ATP dependent RNA helicase;35S primary transcript processing
Contig4-3023_0023	RPC40	0.994	0.944	0.369	0.010	0.898	0.730	0.848	0.302	1.119	0.427	0.848	0.634	0.565	0.034	0.723	0.258	0.951	0.849	1.091	0.573	0.567	0.028	1.084	0.108	orf6.5765;RPC40	YPR110C;RPC40	RNA polymerase subunit	YPR110C	RNA polymerase III (C) subunit	1.00E-136	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase III;DNA-directed RNA polymerase I;DNA-directed RNA polymerase III;transcription, from Pol I promoter;transcription, from Pol III promoter"
Contig4-3005_0028	RRP5	0.976	0.888	0.283	0.002	0.558	0.089	0.751	0.463	1.128	0.517	0.992	0.989	0.378	0.073	0.979	0.904	0.998	0.968	0.640	0.141	0.747	0.090	0.618	0.247	orf6.5342;RRP5	(AL031740) putative rRNA biogenesis protein; rrp5 homolog; m	ribosomal RNA processing	YMR229C	Protein required for processing of pre-rRNA	1.00E-111	nucleolus;RNA binding;rRNA processing
Contig4-2581_0008	orf6.4075	0.982	0.908	0.537	0.029	0.504	0.022	0.608	0.077	0.237	0.418	0.337	0.193	0.840	0.735	0.508	0.138	0.955	0.851	1.237	0.104	1.136	0.086	1.447	0.172	orf6.4075	YNL262W;pol2	DNA polymerase II	YNL262W	DNA polymerase II	3.00E-31	replication fork;epsilon DNA polymerase;lagging strand elongation;leading strand elongation;mismatch repair;nucleotide-excision repair
Contig4-2647_0006	YMR49	0.959	0.855	0.395	0.010	0.578	0.088	0.693	0.189	1.102	0.640	0.627	0.206	0.799	0.321	1.065	0.117	0.998	0.968	1.229	0.606	1.072	0.824	1.319	0.363	orf6.2129;orf6.2128;YMR49	YMR049C;ERB1	beta-transducin-like protein	YMR049C		1.00E-180	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2024_0003	YGL64	0.964	0.868	0.463	0.005	0.519	0.037	0.665	0.038	1.310	0.424	1.023	0.969	1.093	0.775	2.105	0.006	0.977	0.895	1.214	0.353	1.233	0.587	1.235	0.518	orf6.4978;YGL64	YGL064C	helicase	YGL064C		6.00E-82	cellular_component unknown;helicase;biological_process unknown
Contig4-3088_0045	ENP1	0.998	0.980	0.209	0.024	0.751	0.172	0.776	0.467									0.994	0.945	0.391	0.032	0.295	0.006	0.922	0.280	orf6.4355;ENP1	YBR247C;ENP1	nuclear protein	YBR247C	Putative 57 kDa protein with an apparent MW of 70 kDa by SDS-PAGE	1.00E-108	protein amino acid glycosylation
Contig4-3095_0030	YGR103	0.983	0.908	0.264	0.003	0.470	0.007	0.641	0.079	0.978	0.473	0.744	0.128	0.468	0.034	1.222	0.045	0.975	0.887	0.748	0.233	0.512	0.025	0.723	0.035	orf6.6843;YGR103	YGR103W	-	YGR103W		1.00E-175	nucleolus;nucleus;molecular_function unknown;biological_process unknown
Contig4-2841_0004	YLR74	0.997	0.959	0.477	0.011	0.593	0.064	0.805	0.485	0.997	0.888	0.421	0.025	0.521	0.004	1.005	0.932	0.994	0.945	0.478	0.011	0.892	0.703	0.567	0.062	orf6.3998;orf6.3790;YLR74	Ylr074cp >gi:2131767:pir::S64906 hypothetical protein YLR074	-	YLR074C	BUD site selection	4.00E-39	cellular_component unknown;cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-3063_0020	orf6.6729	0.992	0.938	0.595	0.012	0.641	0.044	0.645	0.056	0.917	0.470	1.879	0.025	1.210	0.426	0.906	0.208	0.995	0.949	1.098	0.518	1.785	0.032	1.072	0.770	orf6.6729	YBL021C;HAP3	transcriptional activator protein of CYC1	YBL021C	transcriptional activator protein of CYC1	9.00E-42	transcription
Contig4-3056_0012	orf6.5507	0.995	0.949	0.513	0.092	0.794	0.157	0.879	0.199	1.045	0.423	0.680	0.235	0.569	0.147	1.124	0.243	0.994	0.947	0.727	0.032	0.591	0.053	0.755	0.086	orf6.5507	YOR224C;rpb8	"16-kDa RNA polymerase subunit (common to polymerases I, II and III)"	YOR224C	"16-kDa RNA polymerase subunit (common to polymerases I, II and III)"	9.00E-47	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase II, core;DNA-directed RNA polymerase III;DNA-directed RNA polymerase I;DNA-directed RNA polymerase II;DNA-directed RNA polymerase III;transcription, from Pol I promoter;transcription, from Pol II promoter;transcription, from Pol II promoter;transcription, from Pol III promoter"
Contig4-2874_0013	ADE2	0.998	0.965	0.592	0.001	1.002	0.971	0.823	0.162	1.030	0.523	0.816	0.477	0.942	0.782	0.797	0.232	0.940	0.829	0.691	0.021	0.572	0.143	1.059	0.859	orf6.9131;ADE2	(AB006759) subunit II of phosphoribosyl aminoimidazole carbo	AIR:carboxylase	YOR128C	phosphoribosylamino-imidazole-carboxylase	1.00E-180	phosphoribosylaminoimidazole carboxylase
Contig4-2930_0013	YNL75	0.999	0.979	0.275	0.025	0.611	0.139	0.648	0.052	0.982	0.881	0.367	0.029	0.505	0.053	1.021	0.791	0.999	0.982	0.633	0.008	0.493	0.058	0.766	0.235	orf6.4828;YNL75	(AF092910) stage specific peptide 24 [Trypanosoma cruzi	-	YNL075W	Interacts With Mpp10. Imp4p is a specific component of the U3 snoRNP and is required for pre-18S rRNA processing.	1.00E-111	small nucleolar ribonucleoprotein particle;small nuclear ribonucleoprotein;35S primary transcript processing;rRNA modification
Contig4-2523_0009	YLR205	1.000	0.987	0.597	0.028	0.642	0.174	0.918	0.478	1.004	0.865	2.097	0.002	0.827	0.036	1.504	0.012	0.999	0.977	1.356	0.252	0.638	0.245	0.618	0.031	orf6.7617;YLR205	YLR205C	-	YLR205C		2.00E-33	molecular_function unknown;biological_process unknown
Contig4-3083_0027	RHD2	0.986	0.916	0.347	0.093	0.268	0.076	0.290	0.018	0.976	0.801	0.626	0.124	0.746	0.016	1.096	0.191	0.972	0.884	0.819	0.133	0.726	0.098	0.808	0.007	orf6.5566	Repressed during hyphae development					
Contig4-2764_0002	SRP40	0.997	0.962	0.577	0.003	1.311	0.162	1.420	0.020	0.940	0.436	0.574	0.255	0.484	0.035	0.901	0.378	0.990	0.929	0.788	0.595	0.433	0.024	0.544	0.193	orf6.3271;orf6.3270;orf6.730;orf6.3272;orf6.731;SRP40	(nucleolar protein	nucleolar protein	YKR092C	"nucleolar protein that is immunologically and structurally related to rat Nopp140, a nonribosomal protein of the nucleolus and coiled bodies."	2.00E-34	nucleolus;chaperone;nucleocytoplasmic transport
Contig4-2122_0003	HOL1	0.993	0.942	0.570	0.001	0.706	0.020	0.756	0.145	1.035	0.621	2.157	0.049	0.893	0.336	1.654	0.014	0.957	0.850	0.742	0.064	0.788	0.033	0.759	0.286	orf6.6692;orf6.97;HOL1	(AL033497) transport protein [Candida albicans	ion transport	YNR055C	Putative ion transporter similar to the major facilitator superfamily of transporters	3.00E-44	transport
Contig4-2113_0003	orf6.5357	0.999	0.983	0.342	0.011	0.804	0.432	0.939	0.410	0.932	0.457	0.581	0.262	0.583	0.009	0.895	0.515	0.946	0.842	0.742	0.040	0.644	0.036	1.116	0.616	orf6.5357	(Z81077) predicted using Genefinder; Similarity to Yeast pro		YML080W		5.00E-163	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2117_0001	orf6.5784	0.953	0.842	0.299	0.018	0.724	0.387	1.169	0.641	1.054	0.427	1.025	0.904	1.196	0.462	0.995	0.978	0.963	0.865	0.433	0.011	0.293	0.005	0.581	0.000	orf6.5784	(AC005917) putative WD-40 repeat protein [Arabidopsis thalia	RiboSome Assembly 2	YMR131C	RiboSome Assembly 2	1.00E-171	molecular_function unknown;ribosome biogenesis
Contig4-1987_0003	ERG3	0.992	0.939	0.474	0.008	0.527	0.034	0.854	0.208	1.215	0.430	0.855	0.567	1.141	0.367	1.074	0.809	0.994	0.944	0.800	0.232	0.859	0.135	0.978	0.864	orf6.3667;orf6.696;ERG3	(D85181) fungal sterol-C5-desaturase homolog [Homo sapiens	C-5 sterol desaturase	YLR056W	C-5 sterol desaturase	1.00E-106	endoplasmic reticulum;C-5 sterol desaturase;ergosterol biosynthesis
Contig4-2925_0002	orf6.6426	0.974	0.886	0.337	0.009	0.390	0.023	0.586	0.032	1.138	0.432	0.557	0.243	0.690	0.142	0.952	0.262	0.982	0.903	0.659	0.125	0.601	0.177	0.782	0.224	orf6.6426	Ygr090wp >gi:1723687:sp:P53254:YG2L_YEAST HYPOTHETICAL 140.5		YGR090W		1.00E-83	molecular_function unknown;biological_process unknown
Contig4-1973_0007	DIS3	0.967	0.872	0.349	0.000	0.689	0.022	0.727	0.154	1.118	0.427	1.214	0.568	1.197	0.132	1.533	0.059	0.835	0.739	1.377	0.352	1.499	0.030	1.616	0.111	orf6.2439;DIS3	(AB023225) KIAA1008 protein [Homo sapiens	Ran-binding protein	YOL021C	3'-5' exoribonuclease complex subunit	4.00E-93	cytoplasmic exosome (RNase complex);nuclear exosome (RNase complex);3'-5' exoribonuclease;35S primary transcript processing;mRNA catabolism
Contig4-2717_0007	orf6.5294	0.995	0.947	0.519	0.033	0.992	0.936	1.063	0.379	0.952	0.582	0.766	0.254	0.995	0.980	1.120	0.087	0.943	0.835	0.474	0.033	0.470	0.028	0.608	0.014	orf6.5294	YNR015W;smm1	Suppressor of Mitochondrial Mutation in the tRNAasp gene	YNR015W	Suppressor of Mitochondrial Mutation in the tRNAasp gene	3.00E-78	molecular_function unknown
Contig4-3036_0007	orf6.8552	0.946	0.832	0.497	0.002	0.717	0.458	0.720	0.517	1.227	0.455	1.112	0.525	0.920	0.640	1.374	0.228	0.922	0.802	0.490	0.079	0.394	0.041	0.486	0.009	orf6.8552	YOR204W;DED1	ATP-dependent RNA helicase of DEAD box family	YOR204W	ATP-dependent RNA helicase of DEAD box family	1.00E-180	RNA processing
Contig4-2671_0009	orf6.5010	0.986	0.914	0.401	0.116	0.202	0.013	0.265	0.124	1.313	0.565	1.041	0.930	0.488	0.101	1.272	0.263	0.977	0.890	0.908	0.462	0.800	0.061	1.310	0.131	orf6.5010;orf6.790;orf6.2939	YMR058W;FET3	multicopper oxidase	YMR058W	multicopper oxidase	1.00E-32	plasma membrane;multicopper ferroxidase iron transport mediator;multicopper ferroxidase iron transport mediator;high affinity iron transport
Contig4-3014_0016	orf6.8138	0.980	0.900	0.704	0.342	0.309	0.086	0.300	0.082	1.132	0.423	0.888	0.374	0.823	0.398	1.041	0.719	0.976	0.887	0.829	0.195	0.695	0.112	0.861	0.461	orf6.8138	YDR432W;NPL3	nuclear shuttling protein with an RNA recognition motif	YDR432W	nuclear shuttling protein with an RNA recognition motif	2.00E-19	
Contig4-2806_0011	IKI1	0.991	0.934	0.509	0.012	1.047	0.860	0.927	0.094	0.749	0.472	0.468	0.041	0.524	0.119	0.518	0.029	0.851	0.719	0.535	0.033	0.410	0.007	0.612	0.047	orf6.5558;IKI1	involved in sensitivity to pGKL killer toxin; Iki1p >gi:7317	killer toxin sensitivity	YHR187W	involved in sensitivity to pGKL killer toxin	2.00E-55	molecular_function unknown
Contig4-2090_0003	orf6.4492	0.995	0.950	0.576	0.016	0.695	0.038	0.994	0.900	1.120	0.424	0.658	0.063	0.573	0.012	1.009	0.937	0.998	0.969	0.709	0.101	0.584	0.123	0.663	0.007	orf6.4492	YNL151C;rpc31	31-kDa subunit of RNA polymerase III (C)\; HMG1 like protein	YNL151C	31-kDa subunit of RNA polymerase III (C)\; HMG1 like protein	2.00E-18	"DNA-directed RNA polymerase III;DNA-directed RNA polymerase III;transcription, from Pol III promoter"
Contig4-2949_0007	orf6.5457	0.939	0.822	0.340	0.003	0.301	0.004	0.279	0.001	0.993	0.934	5.792	0.021	1.696	0.010	2.153	0.018	0.994	0.944	0.681	0.118	0.719	0.039	1.046	0.710	orf6.5457	(D16304) LTG3 protein [Saccharomyces cerevisiae] >gi:1094066	Amino acid permease	YBR132C	Amino acid permease	3.00E-98	endoplasmic reticulum membrane;integral plasma membrane protein;vacuolar membrane;hydrogen:amino acid symporter;fatty acid metabolism
Contig4-3070_0024	ERG25	0.980	0.899	0.392	0.000	0.524	0.066	0.645	0.212	1.161	0.426	0.916	0.867	0.944	0.853	1.600	0.032	0.945	0.837	0.558	0.152	0.522	0.072	0.704	0.201	orf6.1690;orf6.1689;orf6.2054;orf6.1843;ERG25	YGR060W;ERG25	C-4 sterol methyl oxidase	YGR060W	C-4 sterol methyl oxidase	1.00E-116	endoplasmic reticulum membrane;plasma membrane;C-4 methyl sterol oxidase;ergosterol biosynthesis
Contig4-3049_0004	RPA12	0.993	0.940	0.458	0.069	0.697	0.304	0.943	0.534	0.940	0.454	0.618	0.212	0.454	0.083	0.912	0.069	0.981	0.902	0.693	0.047	0.551	0.269	0.855	0.397	orf6.2447;RPA12	YJR063W;RPA12	RNA polymerase subunit	YJR063W	A12.2 subunit of RNA polymerase I	4.00E-50	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase I;transcription, from Pol I promoter"
Contig4-3104_0032	SKI6	0.999	0.984	0.688	0.006	1.005	0.975	1.136	0.715	0.932	0.423	0.834	0.322	0.540	0.010	0.987	0.926	0.976	0.888	0.595	0.034	0.486	0.004	0.611	0.098	orf6.7881;SKI6	YGR195W;SKI6	superkiller	YGR195W	homolog of RNAse PH	2.00E-82	cytoplasmic exosome (RNase complex);nuclear exosome (RNase complex);3'-5' exoribonuclease;35S primary transcript processing;mRNA catabolism;mRNA catabolism
Contig4-1679_0002	RRP3	0.992	0.936	0.588	0.025	0.971	0.626	1.085	0.625	1.070	0.462	0.443	0.039	0.571	0.072	1.017	0.903	0.990	0.929	0.512	0.026	0.372	0.007	0.649	0.133	orf6.8894;RRP3	(D64004) ATP-dependent RNA helicase DeaD [Synechocystis sp.	ribosomal RNA processing	YHR065C	RRP3 is a DEAD box gene homologous to eIF-4a which encodes an RNA-dependent ATPase possessing helicase activity which is not specific for RNA	1.00E-105	nucleolus;ATP dependent RNA helicase;35S primary transcript processing;mRNA splicing
Contig4-2813_0010	YCR47	0.991	0.933	0.328	0.001	0.749	0.031	0.773	0.186	0.913	0.443	0.767	0.359	0.603	0.006	1.084	0.836	0.991	0.934	0.556	0.032	0.468	0.071	0.851	0.219	orf6.5038;YCR47	"(U40419) similar to S. cerevisiae gene YCR47C, putative 30.7"	SAM-binding protein	YCR047C	Protein carboxyl methylase	1.00E-106	molecular_function unknown;biological_process unknown
Contig4-2410_0006	PRS1	0.999	0.975	0.558	0.031	0.852	0.019	0.959	0.718	1.016	0.778	0.719	0.179	0.914	0.423	0.753	0.094	1.000	0.986	0.906	0.334	0.662	0.296	0.963	0.798	orf6.5345;orf6.1887;PRS1	(D84434) 41-kDa phosphoribosylpyrophosphate synthetase-assoc	phosporibosyl pyrophosphate synthetase	YHL011C	ribose-phosphate pyrophosphokinase 3	1.00E-157	cytoplasm;ribose-phosphate pyrophosphokinase;`de novo` IMP biosynthesis;`de novo` pyrimidine biosynthesis;histidine biosynthesis;purine salvage;tryptophan biosynthesis
Contig4-2452_0006	YGL111	0.991	0.934	0.234	0.053	0.730	0.131	0.946	0.799	0.920	0.440	0.256	0.008	0.381	0.035	0.991	0.869	0.954	0.845	0.673	0.248	0.556	0.032	0.733	0.227	orf6.3421;YGL111	(homology to S.cerevisiae YGL111) (-	-	YGL111W		1.00E-22	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-3079_0005	YLR51	1.000	0.989	0.490	0.008	0.722	0.248	0.752	0.140	0.912	0.427	0.629	0.073	0.569	0.044	1.008	0.942	0.979	0.900	1.057	0.833	0.762	0.141	1.084	0.435	orf6.5394;YLR51	YOR047C;STD1	-	YOR047C	homologous to MTH1\; interacts with the SNF1 protein kinase and TBP in two-hybrid and in in vitro binding studies	5.00E-09	
Contig4-2128_0002	SNF8	0.998	0.966	0.394	0.002	0.730	0.165	1.053	0.083	0.922	0.546	0.466	0.117	0.752	0.031	1.143	0.272	0.984	0.911	0.934	0.510	0.764	0.048	0.926	0.404	orf6.5447;SNF8	(AL133225) probable pseudouridylate synthase [Schizosaccharo	invertase regulation	YFL001W	Depressed growth-rate protein	1.00E-114	cytoplasm;nucleus;pseudouridylate synthase;pseudouridylate synthase;RNA processing
Contig4-2090_0002	YPR137	0.960	0.857	0.315	0.003	0.809	0.261	0.810	0.441	0.919	0.424	0.260	0.120	0.543	0.065	0.941	0.256	0.994	0.944	0.689	0.043	0.734	0.331	0.915	0.524	orf6.4491;YPR137	YPR137W;RRP9	beta-transducin-like protein	YPR137W	U3 small nucleolar ribonucleoprotein-associated protein involved in pre-ribosomal RNA processing.	1.00E-125	small nucleolar ribonucleoprotein particle;small nuclear ribonucleoprotein;35S primary transcript processing;rRNA modification
Contig4-2851_0001	YOR243	0.997	0.960	0.313	0.018	0.570	0.088	0.875	0.347	0.910	0.423	0.626	0.220	0.582	0.017	0.947	0.316	0.924	0.811	0.739	0.199	0.508	0.100	0.751	0.298	orf6.1078;orf6.1079;YOR243;SPT23;CAX4;CAX3;CAX2;CAX1	(AL031174) hypothetical protein [Schizosaccharomyces pombe	-	YOR243C		1.00E-148	molecular_function unknown;biological_process unknown
Contig4-3103_0031	orf6.8212	0.977	0.894	0.216	0.014	0.563	0.311	0.846	0.393	0.968	0.427	0.491	0.177	0.420	0.037	1.055	0.573	0.999	0.973	0.987	0.944	0.408	0.032	1.091	0.633	orf6.8212;orf6.8211						
Contig4-2812_0004	GDH1	0.999	0.982	0.358	0.182	0.803	0.216	1.051	0.939	1.162	0.423	0.623	0.565	0.531	0.220	1.340	0.310	0.990	0.928	0.648	0.159	1.892	0.005	0.933	0.752	orf6.3152;GDH1	(D49475) glutamate dehydrogenase [Zea mays	NADP-dependent glutamate dehydrogenase	YAL062W	NADP-linked glutamate dehydrogenase	1.00E-180	glutamate dehydrogenase (NADP+)
Contig4-1655_0004	orf6.8287	0.990	0.928	0.370	0.166	0.670	0.137	0.838	0.331	0.963	0.582	0.527	0.248	0.622	0.010	1.231	0.158	0.976	0.891	0.567	0.018	0.583	0.014	0.903	0.594	orf6.8287	YMR014W;BUD22	BUD site selection	YMR014W	BUD site selection	4.00E-06	molecular_function unknown;biological_process unknown
Contig4-2932_0019	orf6.5805	0.965	0.872	0.628	0.114	0.358	0.007	0.680	0.421	1.077	0.582	0.909	0.739	1.419	0.354	1.122	0.197	0.956	0.857	0.603	0.019	1.039	0.827	0.668	0.103	orf6.5805						
Contig4-1775_0006	orf6.2115	0.969	0.872	0.382	0.045	0.668	0.054	0.771	0.406	1.022	0.448	1.120	0.135	0.828	0.021	1.206	0.239	0.990	0.928	0.652	0.254	0.696	0.177	0.614	0.184	orf6.2115	(M96600) A49 [Saccharomyces cerevisiae	49-kDa alpha subunit of RNA polymerase A	YNL248C	49-kDa alpha subunit of RNA polymerase A	1.00E-34	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase I;transcription, from Pol I promoter"
Contig4-2792_0016	YNR67	0.987	0.919	0.551	0.005	0.695	0.059	0.806	0.235	1.228	0.449	0.954	0.837	0.788	0.277	1.143	0.574	0.988	0.920	0.444	0.049	0.255	0.060	0.648	0.198	orf6.7803;YNR67	(AL033391) conserved hypothetical protein [Candida albicans	-	YNR067C		1.00E-120	molecular_function unknown;biological_process unknown
Contig4-2512_0001	YDL31	0.961	0.857	0.190	0.003	0.618	0.005	0.762	0.139	0.914	0.427	0.429	0.084	0.383	0.065	0.925	0.470	0.996	0.958	0.604	0.055	0.383	0.038	0.630	0.043	orf6.9046;orf6.9047;YDL31	(D64004) ATP-dependent RNA helicase DeaD [Synechocystis sp.	RNA helicase	YDL031W	similar to RNA helicases	1.00E-180	nucleolus;ATP dependent RNA helicase;35S primary transcript processing;ribosomal large subunit assembly and maintenance
Contig4-2174_0003	YOL11	0.991	0.932	0.313	0.027	0.491	0.034	0.995	0.961	0.949	0.425	0.623	0.149	0.654	0.339	0.843	0.346	0.916	0.791	0.493	0.024	0.378	0.020	1.343	0.369	orf6.796;YOL11	(D89183) similar to Saccharomyces cerevisiae lysophospholipa	phospholipase	YOL011W	phospholipase B\/lysophospholipase	1.00E-58	lysophospholipase
Contig4-2295_0005	orf6.1781	0.949	0.837	0.255	0.010	0.453	0.007	0.669	0.060	1.095	0.459	0.908	0.722	0.715	0.089	0.976	0.868	0.987	0.921	0.729	0.035	0.610	0.111	0.731	0.114	orf6.1781;orf6.7186	(AB004538) protein arginine N-methyltransferase [Schizosacch	nuclear protein arginine methyltransferase (mono- and asymmetrically dimethylating enzyme)	YBR034C	nuclear protein arginine methyltransferase (mono- and asymmetrically dimethylating enzyme)	1.00E-122	
Contig4-3079_0006	YLR51	0.960	0.865	0.378	0.013	0.654	0.288	0.851	0.086	1.043	0.501	0.589	0.226	0.447	0.031	0.998	0.980	0.987	0.922	0.844	0.145	0.717	0.323	0.935	0.677	orf6.5396;orf6.5395;YLR51;SEC61	YLR051C	-	YLR051C		3.00E-39	molecular_function unknown;biological_process unknown
Contig4-2623_0007	orf6.3766	0.995	0.951	0.442	0.011	0.918	0.494	0.961	0.742	1.268	0.444	0.776	0.512	0.580	0.078	1.354	0.005	0.995	0.949	1.763	0.037	0.575	0.071	0.771	0.119	orf6.3766;orf6.3767	YGL099W;KRE35		YGL099W		1.00E-180	molecular_function unknown;biological_process unknown
Contig4-2622_0005	DBP3	0.969	0.873	0.129	0.002	0.429	0.037	0.656	0.130	1.145	0.472	0.711	0.263	0.633	0.018	1.526	0.047	0.965	0.867	0.662	0.049	0.276	0.005	0.777	0.214	orf6.2585;orf6.3829;DBP3	YGL078C;DBP3	RNA helicase	YGL078C	ATP-dependent RNA helicase CA3 of the DEAD\/DEAH box family	1.00E-165	nucleolus;ATP dependent RNA helicase;35S primary transcript processing;ribosomal large subunit assembly and maintenance
Contig4-2775_0013	YOR240	0.991	0.936	0.352	0.023	0.806	0.265	0.990	0.973	1.184	0.431	1.085	0.866	0.817	0.090	1.332	0.326	0.967	0.869	0.425	0.082	0.306	0.050	0.478	0.075	orf6.6487;YOR240	(AL132949) predicted using Genefinder; preliminary predictio	-	YOR239W	actin filament binding protein	1.00E-114	actin filament;actin filament;actin cross-linking;actin cytoskeleton organization and biogenesis
Contig4-1822_0002	orf6.1935	0.979	0.901	0.263	0.003	0.646	0.033	0.767	0.260	1.028	0.818	0.718	0.533	0.867	0.668	1.072	0.700	0.935	0.826	0.614	0.019	0.627	0.176	0.834	0.370	orf6.1935;orf6.1340	Binding Protein of Krr1p; Kri1p >gi:1176590:sp:P42846:YN48_Y	Binding Protein of Krr1p	YNL308C	Binding Protein of Krr1p	1.00E-26	nucleolus;molecular_function unknown;ribosome biogenesis
Contig4-3035_0012	YGR245	0.983	0.908	0.196	0.041	0.469	0.142	0.732	0.098	1.091	0.450	0.465	0.169	0.442	0.058	1.298	0.054	0.990	0.927	0.587	0.104	0.309	0.038	0.779	0.277	orf6.6545;orf6.6544;YGR245	YGR245C;SDA1	-	YGR245C	Severe Depolymerization of Actin	1.00E-180	molecular_function unknown
Contig4-2215_0003	EFG1	0.979	0.900	0.990	0.925	0.318	0.003	0.439	0.011	0.982	0.427	0.619	0.352	1.291	0.066	1.046	0.719	0.966	0.873	0.697	0.246	0.738	0.258	0.819	0.193	orf6.2978;orf6.4821;EFG1	(AJ007730) mycelial growth factor-1 [Yarrowia lipolytica	transcription factor	YMR016C	displays homologies to several transcription factors	2.00E-52	cellular_component unknown;transcription factor;pseudohyphal growth
Contig4-2906_0005	YDL213	0.991	0.935	0.181	0.014	0.491	0.185	0.565	0.049	1.026	0.524	0.740	0.517	0.362	0.062	1.063	0.364	0.989	0.924	0.733	0.047	0.644	0.209	0.971	0.592	orf6.5120;YDL213	(-	-	YDL213C		1.00E-25	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2332_0005	orf6.2043	0.996	0.956	0.571	0.072	0.765	0.332	0.966	0.820	0.947	0.708	0.827	0.120	0.709	0.097	0.846	0.140	0.966	0.869	0.665	0.050	0.392	0.007	0.674	0.028	orf6.2043;orf6.274	Ynr046wp >gi:1730682:sp:P53738:YN8Q_YEAST HYPOTHETICAL 15.1		YNR046W		2.00E-26	molecular_function unknown;biological_process unknown
Contig4-2731_0002	orf6.4691	0.996	0.958	0.514	0.034	0.572	0.019	0.605	0.088	1.051	0.491	0.580	0.054	0.995	0.967	1.470	0.006	0.976	0.887	0.491	0.005	0.522	0.045	1.087	0.654	orf6.4691	YLR105C;SEN2	tRNA splicing endonuclease subunit	YLR105C	tRNA splicing endonuclease subunit	4.00E-50	nuclear inner membrane;tRNA-intron endonuclease;tRNA-intron endonuclease;tRNA splicing
Contig4-2832_0006	YKL27	0.997	0.961	0.482	0.009	0.831	0.253	1.083	0.410	1.037	0.613	0.743	0.565	0.797	0.224	1.153	0.132	0.956	0.848	0.674	0.011	0.348	0.018	0.711	0.026	orf6.4746;orf6.117;orf6.4745;YKL27;YHR3	(Z99258) hypothetical protein [Schizosaccharomyces pombe	molybdopterin biosynthesis-like protein	YKL027W		1.00E-135	molecular_function unknown;biological_process unknown
Contig4-2664_0021	YJL10	0.989	0.925	0.197	0.017	0.668	0.010	0.876	0.637	0.993	0.983	0.824	0.611	0.851	0.551	1.392	0.096	0.988	0.923	0.611	0.109	0.348	0.036	0.787	0.193	orf6.4308;YJL10	YJL010C	-	YJL010C		4.00E-60	molecular_function unknown;biological_process unknown
Contig4-2539_0003	YGL29	0.997	0.964	0.165	0.005	0.628	0.095	0.740	0.034	1.173	0.426	0.521	0.439	0.389	0.034	1.117	0.489	0.969	0.878	0.396	0.012	0.254	0.006	0.483	0.056	orf6.5536;YGL29	YGL029W;CGR1	chromatin assembly	YGL029W	coiled-coil protein	4.00E-11	nucleolus;molecular_function unknown;molecular_function unknown;ribosome biogenesis
Contig4-2611_0011	orf6.5913	0.994	0.945	0.129	0.003	0.538	0.022	0.439	0.020	1.042	0.423	0.493	0.246	0.596	0.131	1.155	0.062	0.967	0.869	0.388	0.004	0.331	0.014	0.522	0.044	orf6.5913;orf6.1443						
Contig4-2813_0004	GDS1	0.984	0.913	0.544	0.048	0.532	0.075	0.596	0.150	1.151	0.517	1.336	0.345	1.265	0.085	1.176	0.431	0.988	0.920	0.527	0.009	0.648	0.004	0.820	0.163	orf6.5041;orf6.5042;GDS1	YOR355W;GDS1	growth on glycerol	YOR355W	involved in nuclear control of mitochondria	5.00E-31	molecular_function unknown
Contig4-2353_0002	YER72	0.991	0.933	0.434	0.023	0.645	0.199	0.842	0.451	0.978	0.505	0.598	0.164	0.703	0.153	1.017	0.874	0.996	0.955	0.671	0.107	0.658	0.057	0.984	0.885	orf6.1784;YER72	(D89159) similar to Saccharomyces serevisiae hypothetical 75	-	YJL012C	polyphosphate synthetase (putative)	1.00E-180	
Contig4-2424_0002	orf6.3119	0.990	0.929	0.309	0.003	0.661	0.039	0.750	0.028	1.028	0.672	0.422	0.186	0.467	0.010	0.938	0.484	0.983	0.911	0.333	0.012	0.354	0.002	0.569	0.009	orf6.3119	YIL127C		YIL127C		4.00E-04	molecular_function unknown;biological_process unknown
Contig4-2080_0001		0.993	0.942	0.805	0.044	0.527	0.028	0.610	0.033	0.967	0.441	0.894	0.128	0.909	0.412	0.817	0.209	0.958	0.859	1.480	0.503	0.824	0.212	0.751	0.116		YDR447C;RPS17B	Ribosomal protein S17B (rp51B)	YDR447C	Ribosomal protein S17B (rp51B)	1.00E-49	cytosolic small ribosomal (40S) subunit;structural protein of ribosome;protein biosynthesis;ribosomal small subunit assembly and maintenance
Contig4-2670_0008	YPL146	0.997	0.963	0.291	0.063	0.648	0.096	0.751	0.193	1.122	0.431	0.728	0.076	0.684	0.115	1.392	0.034	0.986	0.917	0.355	0.049	0.223	0.013	0.522	0.043	orf6.7150;YPL146	YPL146C	-	YPL146C		2.00E-33	nucleolus;nucleus;molecular_function unknown;biological_process unknown
Contig4-2557_0004	orf6.4595	0.958	0.853	0.374	0.002	0.674	0.032	0.797	0.069	1.173	0.423	0.374	0.013	0.693	0.059	1.234	0.175	0.999	0.983	0.326	0.011	0.305	0.012	0.551	0.055	orf6.4595;orf6.179	Yil110wp >gi:731858:sp:P40481:YIL0_YEAST HYPOTHETICAL 42.5 K		YIL110W		1.00E-47	molecular_function unknown;biological_process unknown
Contig4-2684_0002	orf6.4247	0.989	0.927	0.527	0.030	0.838	0.074	1.259	0.199	1.117	0.621	0.640	0.351	0.800	0.490	0.993	0.971	0.985	0.911	0.470	0.089	0.188	0.025	0.570	0.156	orf6.4247	YOR341W;rpa190	RNA polymerase I subunit 190 (alpha)	YOR341W	RNA polymerase I subunit 190 (alpha)	3.00E-98	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase I;transcription, from Pol I promoter"
Contig4-2359_0006	YDR237	0.988	0.921	0.574	0.035	0.825	0.008	1.002	0.960	1.021	0.821	0.899	0.788	1.044	0.583	0.971	0.926	0.989	0.926	0.648	0.078	0.633	0.089	0.796	0.068	orf6.4259;YDR237	Mitochondrial ribosomal protein MRPL7 (YmL7); Mrpl7p >gi:171	mitochondrial ribosomal protein	YDR237W	Mitochondrial ribosomal protein MRPL7 (YmL7)	9.00E-71	mitochondrial large ribosomal subunit;structural protein of ribosome;protein biosynthesis
Contig4-2751_0004	orf6.6678	1.000	0.988	0.489	0.021	0.648	0.122	0.688	0.192	0.976	0.460	0.816	0.321	0.404	0.032	0.768	0.208	0.954	0.854	0.517	0.110	0.396	0.107	0.458	0.121	orf6.6678	(Z81042) similar to Yeast hypothetical protein YEY6 like; cD		YER156C		1.00E-124	molecular_function unknown;biological_process unknown
Contig4-2619_0001	DBP3	0.998	0.966	0.139	0.001	0.616	0.031	0.901	0.251	1.122	0.431	0.617	0.276	0.587	0.022	1.344	0.118	0.975	0.891	0.532	0.040	0.260	0.022	0.711	0.332	orf6.2585;orf6.3829;DBP3	YGL078C;DBP3	RNA helicase	YGL078C	ATP-dependent RNA helicase CA3 of the DEAD\/DEAH box family	1.00E-115	nucleolus;ATP dependent RNA helicase;35S primary transcript processing;ribosomal large subunit assembly and maintenance
Contig4-3078_0021	MLS1	0.995	0.951	0.328	0.024	0.792	0.581	0.992	0.967	0.937	0.424	0.321	0.080	0.621	0.033	1.017	0.213	0.908	0.784	0.422	0.010	0.241	0.009	0.677	0.021	orf6.7376;MLS1	YER082C;KRE31	catabolite-sensitive malate synthase	YER082C		1.00E-180	molecular_function unknown;biological_process unknown
Contig4-3030_0014	YNL175	0.992	0.936	0.189	0.001	0.533	0.002	0.884	0.123	1.132	0.423	0.681	0.177	0.572	0.039	1.262	0.168	0.999	0.976	0.441	0.019	0.406	0.179	0.762	0.336	orf6.8865;YNL175	YNL175C;NOP13	RNA-binding protein	YNL175C	nucleolar protein	2.00E-75	molecular_function unknown;biological_process unknown
Contig4-3073_0011	YDL60	0.995	0.948	0.373	0.002	0.595	0.200	0.734	0.099	0.989	0.608	0.479	0.136	0.807	0.211	1.201	0.195	0.995	0.949	0.409	0.005	0.258	0.023	0.710	0.051	orf6.7837;YDL60	YDL060W	-	YDL060W		1.00E-172	molecular_function unknown;biological_process unknown
Contig4-3095_0042	YPR143	0.911	0.800	0.208	0.111	0.597	0.493	0.959	0.907	0.947	0.535	0.379	0.298	0.363	0.055	0.938	0.660	0.827	0.733	0.980	0.844	0.495	0.109	1.147	0.692	orf6.367;YPR143	YPR143W	-	YPR143W		5.00E-41	molecular_function unknown;biological_process unknown
Contig4-2740_0008	orf6.7403	0.994	0.945	0.493	0.037	0.907	0.434	1.109	0.578	0.998	0.978	0.421	0.041	0.437	0.014	0.920	0.382	0.978	0.897	0.598	0.161	0.478	0.019	0.858	0.617	orf6.7403	YJL011C		YJL011C		3.00E-19	molecular_function unknown;biological_process unknown
Contig4-3080_0020	YML18	0.994	0.944	0.512	0.050	0.736	0.276	0.619	0.258	0.423	0.421	0.373	0.011	0.868	0.064	0.933	0.539	0.993	0.939	0.667	0.032	0.483	0.027	0.763	0.061	orf6.8587;YML18	YML018C	-	YML018C		6.00E-74	molecular_function unknown;biological_process unknown
Contig4-3097_0053	orf6.8100	0.996	0.956	0.636	0.054	0.527	0.007	0.563	0.171	1.111	0.449	1.160	0.486	1.554	0.120	1.188	0.025	1.000	0.987	0.587	0.057	0.792	0.111	1.115	0.366	orf6.8100						
Contig4-3036_0030	orf6.8544	0.993	0.942	0.102	0.003	0.495	0.226	0.626	0.136	0.975	0.857	0.306	0.049	0.397	0.003	1.311	0.171	0.990	0.930	0.773	0.137	0.401	0.267	0.748	0.082	orf6.8544	YPL093W;NOG1	(putative) nucleolar G-protein\; homologs identified in human and Trypanosoma brucei	YPL093W	(putative) nucleolar G-protein\; homologs identified in human and Trypanosoma brucei	2.00E-22	nucleolus;GTPase;biological_process unknown;biological_process unknown
Contig4-1650_0001	YKR81	0.942	0.837	0.239	0.008	0.615	0.321	0.871	0.340	0.968	0.423	0.807	0.434	0.421	0.008	0.840	0.304	0.901	0.790	0.944	0.357	0.943	0.735	1.063	0.576	orf6.4648;YKR81	(AB027884) Hypothetical nuclear protein [Schizosaccharomyces	-	YKR081C		1.00E-107	molecular_function unknown;biological_process unknown
Contig4-2244_0003	FAD1	0.912	0.802	0.351	0.042	0.609	0.181	0.937	0.670	0.901	0.696	0.442	0.344	0.547	0.176	0.771	0.206	0.968	0.870	0.524	0.006	0.999	0.989	1.366	0.260	orf6.1443;orf6.5913;FAD1	(D43688) plastid omega-3 fatty acid desaturase [Triticum aes	delta-12 oleate desaturase				
Contig4-2909_0003	orf6.4152	1.000	0.994	0.246	0.037	0.634	0.268	0.918	0.002	0.964	0.559	0.350	0.011	0.410	0.081	0.996	0.975	0.989	0.927	0.729	0.348	0.401	0.088	0.716	0.292	orf6.4152	YGL120C;PRP43	RNA helicase	YGL120C	RNA helicase	1.00E-180	"spliceosome;ATP dependent RNA helicase;pre-mRNA splicing factor;lariat formation, 5'-splice site cleavage"
Contig4-2906_0018	orf6.5126	0.974	0.885	0.561	0.015	0.709	0.060	0.852	0.361	0.913	0.442	0.919	0.478	0.681	0.063	0.841	0.283	0.922	0.801	0.571	0.199	0.445	0.136	0.620	0.089	orf6.5126	Rai1p >gi:1723981:sp:P53063:YGZ6_YEAST HYPOTHETICAL 44.5 KD		YGL246C		3.00E-74	molecular_function unknown;biological_process unknown
Contig4-2802_0011	YER6	0.983	0.910	0.233	0.059	0.552	0.142	0.907	0.787	1.379	0.427	0.678	0.295	0.502	0.031	1.284	0.128	0.973	0.882	0.628	0.102	0.295	0.024	0.779	0.033	orf6.3461;orf6.3460;YER6	(AL031743) putative protein transport protein [Schizosacchar	GTP binding protein	YER006W		1.00E-137	nucleolus;nucleus;molecular_function unknown;biological_process unknown
Contig4-2990_0009	orf6.4286	0.998	0.966	0.459	0.061	0.901	0.538	1.130	0.026	1.018	0.467	0.584	0.214	0.528	0.044	1.075	0.152	1.000	0.993	0.574	0.014	0.468	0.011	0.589	0.028	orf6.4286	(D64004) ATP-dependent RNA helicase DeaD [Synechocystis sp.	Probable pre-mRNA splicing RNA-helicase	YBR142W	Probable pre-mRNA splicing RNA-helicase	1.00E-172	nucleus;ATP dependent RNA helicase;rRNA processing;ribosomal large subunit assembly and maintenance
Contig4-2955_0019	orf6.4231	0.999	0.981	0.558	0.040	1.047	0.907	1.176	0.106	0.887	0.426	0.816	0.014	0.781	0.207	0.974	0.067	0.985	0.915	0.746	0.228	0.637	0.059	0.745	0.062	orf6.4231						
Contig4-3103_0032	orf6.8211	0.903	0.791	0.262	0.063	0.582	0.420	0.859	0.647	0.964	0.437	0.448	0.195	0.279	0.023	0.874	0.148	0.966	0.875	0.938	0.662	0.417	0.072	0.987	0.955	orf6.8211;orf6.8212	YDR156W;RPA14	RNA polymerase I subunit A14	YDR156W	RNA polymerase I subunit A14	0.001	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase I;transcription, from Pol I promoter"
Contig4-3033_0019	ELF1	0.997	0.963	0.497	0.021	0.809	0.079	0.905	0.658	0.981	0.452	0.365	0.012	0.656	0.248	1.046	0.792	0.999	0.982	0.537	0.049	0.268	0.010	0.539	0.072	orf6.8413;ELF1	YPL226W;NEW1	elongation-like factor	YPL226W	"This gene encodes a protein with an Q\/N-rich amino terminal domain that acts as a prion, termed [NU]+."	1.00E-180	molecular_function unknown;biological_process unknown
Contig4-2975_0014	orf6.4949	0.986	0.917	0.552	0.021	0.817	0.539	1.020	0.760	0.974	0.444	0.502	0.033	0.582	0.063	1.073	0.645	0.998	0.970	1.236	0.351	0.827	0.604	0.852	0.384	orf6.4949	(AP000006) 1117aa long hypothetical DNA-directed RNA polymer	second-largest subunit of RNA polymerase III	YOR207C	second-largest subunit of RNA polymerase III	1.00E-180	"DNA-directed RNA polymerase III;DNA-directed RNA polymerase III;transcription, from Pol III promoter"
Contig4-3097_0049	YNL288	0.995	0.949	0.636	0.001	0.664	0.024	0.711	0.031	0.940	0.561	0.815	0.207	0.858	0.258	0.892	0.371	0.933	0.812	0.538	0.096	0.670	0.011	0.471	0.016	orf6.8098;YNL288	YNL288W;CAF40	sexual development	YNL288W	CCR4 associated factor 40 kDa	4.00E-66	
Contig4-3035_0014	orf6.6547	0.992	0.938	0.561	0.014	0.859	0.390	0.746	0.327	0.244	0.419	0.589	0.060	0.557	0.070	0.782	0.191	0.972	0.886	1.064	0.790	0.786	0.344	1.243	0.312	orf6.6547						
Contig4-3044_0008	YNR53	0.987	0.920	0.279	0.042	0.627	0.334	0.881	0.518	0.966	0.491	0.234	0.120	0.491	0.030	1.060	0.604	0.918	0.793	0.463	0.010	0.382	0.025	0.714	0.213	orf6.4912;YNR53	YNR053C	nucleolar protein	YNR053C		2.00E-85	nucleus;molecular_function unknown;biological_process unknown
Contig4-3070_0014	KAR4	0.998	0.970	0.345	0.010	0.374	0.055	0.462	0.000	0.949	0.462	0.579	0.239	0.785	0.050	1.153	0.135	0.990	0.930	1.190	0.515	0.556	0.080	0.853	0.367	orf6.5466;orf6.1096;KAR4	YCL055W;KAR4	karyogamy gene induction	YCL055W	transcription factor involved in karyogamy	4.00E-91	nucleus;transcription factor;meiosis;mitosis;nuclear fusion during karogamy
Contig4-3020_0003	orf6.4867	0.993	0.942	0.278	0.022	0.778	0.578	0.965	0.620	0.978	0.872	0.531	0.291	0.378	0.010	1.082	0.462	0.981	0.903	0.558	0.026	0.471	0.253	0.724	0.044	orf6.4867;orf6.4868	YLR435W		YLR435W		6.00E-50	molecular_function unknown;biological_process unknown
Contig4-2828_0002	TFC2	0.996	0.956	0.361	0.018	0.667	0.048	0.770	0.075	1.072	0.621	0.818	0.646	1.090	0.324	1.106	0.369	0.886	0.755	0.451	0.080	0.383	0.010	0.600	0.151	orf6.2514;orf6.2513;TFC2	Transcription factor IIIA (TFIIIA) with putative Zn-fingers;	transcription factor IIIA	YPR186C	Transcription factor IIIA (TFIIIA) with putative Zn-fingers	9.00E-58	"transcription factor complex;RNA polymerase III transcription factor;RNA polymerase III transcription factor;transcription initiation, from Pol III promoter;transcription initiation, from Pol III promoter"
Contig4-2860_0018	YOL142	0.992	0.938	0.598	0.021	1.000	1.000	1.017	0.947	0.996	0.929	0.562	0.029	0.579	0.041	0.956	0.469	0.999	0.981	0.491	0.019	0.557	0.137	0.751	0.059	orf6.7199;YOL142	Rrp40p >gi:2132020:pir::S61872 hypothetical protein YOL142w	-	YOL142W	Rrp40p	2.00E-55	cytoplasmic exosome (RNase complex);nuclear exosome (RNase complex);3'-5' exoribonuclease;35S primary transcript processing;mRNA catabolism
Contig4-2781_0003	RRP4	0.968	0.875	0.388	0.013	0.816	0.076	0.797	0.064	1.121	0.452	0.725	0.090	0.639	0.028	1.150	0.119	0.941	0.824	0.448	0.023	0.534	0.019	0.691	0.013	orf6.2776;RRP4	"(AL035475) conserved hypothetical protein, MAL4P2.38 [Plasmo"	ribosomal RNA processing	YHR069C	"3->5 exoribonuclease\; Component of the exosome 3->5 exonuclease complex with Rrp41p, Rrp42p, Rrp43p and Dis3p (Rrp44p)."	3.00E-98	cytoplasmic exosome (RNase complex);nuclear exosome (RNase complex);3'-5' exoribonuclease;35S primary transcript processing;mRNA catabolism
Contig4-3056_0007		0.985	0.911	0.493	0.026	0.742	0.201	0.782	0.176	0.942	0.435	1.159	0.305	1.071	0.152	1.022	0.844	0.972	0.884	0.626	0.009	0.692	0.196	0.811	0.352							
Contig4-3068_0022	orf6.3888	0.990	0.930	0.588	0.004	0.782	0.365	1.150	0.550	1.245	0.423	0.465	0.040	0.452	0.047	1.289	0.432	0.986	0.915	0.353	0.016	0.283	0.083	0.536	0.097	orf6.3888	YJL050W;MTR4	RNA helicase	YJL050W	RNA helicase	1.00E-180	nucleolus;ATP dependent RNA helicase;35S primary transcript processing
Contig4-2896_0013	orf6.8666	0.999	0.976	0.417	0.020	0.883	0.461	0.839	0.292	0.952	0.428	0.575	0.170	0.698	0.233	1.037	0.690	0.980	0.903	1.138	0.655	0.877	0.214	1.024	0.859	orf6.8666						
Contig4-3061_0009	DIM1	0.978	0.893	0.184	0.006	0.646	0.246	0.701	0.055	0.906	0.428	0.508	0.178	0.563	0.099	0.993	0.918	0.922	0.798	0.342	0.008	0.221	0.016	0.667	0.075	orf6.7999;DIM1	YPL266W;DIM1	dimethyladenosine transferase	YPL266W	dimethyladenosine transferase	1.00E-150	"nucleolus;rRNA (adenine-N6,N6-)-dimethyltransferase;35S primary transcript processing;rRNA modification"
Contig4-3071_0003	SOF1	0.989	0.925	0.236	0.000	0.630	0.040	0.769	0.007	0.954	0.556	0.372	0.024	0.638	0.205	1.071	0.405	0.992	0.938	0.338	0.050	0.311	0.033	0.666	0.084	orf6.8643;SOF1	YLL011W;SOF1	ribosomal RNA processing	YLL011W	56 kDa nucleolar snRNP protein that shows homology to beta subunits of G-proteins and the splicing factor Prp4	1.00E-162	small nucleolar ribonucleoprotein particle;small nuclear ribonucleoprotein;35S primary transcript processing;rRNA modification
Contig4-2587_0002	orf6.267	0.967	0.869	0.125	0.000	0.589	0.026	0.826	0.043	1.077	0.423	0.185	0.022	0.362	0.026	1.014	0.916	0.982	0.906	0.497	0.046	0.228	0.116	0.717	0.064	orf6.267;orf6.1369	(AJ223010) Pmt2 [Schizosaccharomyces pombe	Putative methyltransferase	YCL054W	Putative methyltransferase	1.00E-167	nucleolus;nucleus;RNA methyltransferase;rRNA processing
Contig4-3097_0044	PRB1	0.979	0.898	0.420	0.092	0.354	0.049	0.313	0.040	1.020	0.817	1.348	0.124	2.058	0.027	1.259	0.047	0.989	0.926	0.935	0.018	1.805	0.033	1.017	0.922	orf6.8096;PRB1	YEL060C;prb1	vacuolar protease B	YEL060C	vacuolar protease B	3.00E-74	vacuole;cerevisin;cerevisin;endopeptidase;sporulation;starvation response;vacuolar protein degradation;vacuolar protein degradation;vacuolar protein degradation
Contig4-3043_0021	YER145	0.996	0.954	0.506	0.062	0.348	0.085	0.526	0.142	1.023	0.701	0.609	0.008	0.619	0.158	1.331	0.086	0.994	0.944	0.309	0.035	0.227	0.170	0.548	0.212	orf6.8131;orf6.8119;YER145;FTR1	YER145C;FTR1	iron permease	YER145C	Iron permease	1.00E-119	transport
Contig4-2945_0015	NHP6	0.991	0.931	0.722	0.192	0.413	0.053	0.403	0.077	0.932	0.434	0.801	0.088	0.793	0.074	1.087	0.593	0.965	0.866	0.782	0.020	0.506	0.042	0.669	0.015	NHP6;YBX1	"Candida albicans nonhistone protein 6 (NHP6) mRNA, complete"	non-histone (HMG)-like protein	YPR052C	11-kDa nonhistone chromosomal protein	7.00E-18	"chromatin;chromatin binding;chromatin binding;establishment and/or maintenance of chromatin architecture;transcription regulation, from Pol II promoter;transcription regulation, from Pol II promoter"
Contig4-2064_0001	NPI46	1.000	0.985	0.372	0.014	0.444	0.002	0.814	0.007	1.247	0.423	0.771	0.453	0.443	0.036	1.183	0.227	0.995	0.951	0.698	0.073	0.222	0.005	0.570	0.153	orf6.3221;NPI46	YLR449W;FPR4	rapamycin-binding protein	YLR449W	60 kDa nuclear FK506 binding protein	3.00E-48	nucleolus;peptidyl-prolyl isomerase;biological_process unknown
Contig4-2752_0016	orf6.7018	0.990	0.928	0.197	0.001	0.845	0.025	0.955	0.107	0.992	0.714	0.199	0.029	0.465	0.083	0.952	0.683	1.000	0.985	0.428	0.024	0.335	0.041	0.495	0.062	orf6.7018	(AL034433) conserved hypothetical protein [Schizosaccharomyc		YPR144C		1.00E-106	nucleus;molecular_function unknown;biological_process unknown
Contig4-3037_0008	orf6.9125	0.981	0.902	0.364	0.077	0.714	0.432	0.979	0.915	0.911	0.599	0.750	0.638	1.040	0.893	1.333	0.016	0.992	0.937	0.636	0.038	0.266	0.011	0.779	0.189	orf6.9125;orf6.9123	YDR060W		YDR060W		1.00E-180	cellular_component unknown;molecular_function unknown;ribosomal large subunit assembly and maintenance
Contig4-2804_0019	ROK1	0.989	0.926	0.363	0.009	0.720	0.136	0.888	0.121	0.857	0.423	0.394	0.112	0.515	0.135	0.890	0.065	0.952	0.841	0.381	0.003	0.303	0.016	0.701	0.043	orf6.2262;ROK1	(D64004) ATP-dependent RNA helicase DeaD [Synechocystis sp.	RNA helicase	YGL171W	RNA helicase involved in rRNA processing	1.00E-161	nucleolus;ATP dependent RNA helicase;35S primary transcript processing;mRNA splicing
Contig4-1657_0002	orf6.1684	0.993	0.940	0.325	0.018	0.521	0.079	0.709	0.029	1.063	0.458	0.780	0.368	0.316	0.034	0.915	0.462	0.990	0.929	0.780	0.064	0.288	0.006	0.773	0.034	orf6.1684	(AB002299) KIAA0301 [Homo sapiens		YLR106C		3.00E-83	molecular_function unknown;biological_process unknown
Contig4-2760_0002	BTS1	0.985	0.913	0.330	0.002	0.675	0.039	0.854	0.352	0.922	0.519	0.472	0.069	0.536	0.126	0.848	0.237	0.942	0.837	0.629	0.034	0.512	0.008	0.876	0.411	orf6.6783;BTS1	(AB016044) GGPP synthase [Mus musculus	geranylgeranyl diphosphate synthase	YPL069C	geranylgeranyl diphosphate synthase	7.00E-44	
Contig4-2882_0011	orf6.3414	0.986	0.917	0.247	0.042	0.615	0.357	0.807	0.132	0.814	0.425	0.361	0.089	0.384	0.040	0.899	0.186	0.896	0.765	0.682	0.116	0.372	0.060	0.558	0.197	orf6.3414	"(AL031534) ribosomal processing, rna binding, nucleolar pro"	RNA recognition motif-containing protein	YPL043W	RNA recognition motif-containing protein	1.00E-126	nucleolus;RNA binding;rRNA processing
Contig4-3039_0010	YKR24	1.000	0.986	0.190	0.006	0.436	0.034	0.537	0.075	0.847	0.423	0.518	0.188	0.429	0.022	0.973	0.471	0.906	0.790	0.528	0.018	0.195	0.032	0.622	0.076	orf6.7166;YKR24	YKR024C;DBP7	RNA helicase	YKR024C	putative RNA helicase	1.00E-165	nucleolus;ATP dependent RNA helicase;35S primary transcript processing;ribosomal large subunit assembly and maintenance
Contig4-3087_0022	orf6.9078	0.998	0.969	0.343	0.107	0.828	0.048	0.860	0.281	0.974	0.423	0.463	0.001	0.651	0.033	1.081	0.575	0.927	0.805	0.604	0.090	0.734	0.394	0.755	0.060	orf6.9078	YDL148C		YDL148C		1.00E-103	nucleolus;nucleus;molecular_function unknown;biological_process unknown
Contig4-2781_0001	YHR70	0.998	0.967	0.631	0.026	1.047	0.016	1.225	0.038	1.098	0.423	0.672	0.160	0.828	0.359	1.091	0.259	0.992	0.937	0.570	0.064	0.491	0.038	0.763	0.051	orf6.2775;YHR70	(Z81486) Similarity to Neurospora met-10+ protein (TR:Q01392	-	YHR070W		1.00E-109	molecular_function unknown;biological_process unknown
Contig4-2462_0007	MRT4	0.999	0.980	0.350	0.002	0.485	0.005	0.512	0.074	0.977	0.645	0.770	0.446	0.579	0.083	0.981	0.635	0.994	0.947	0.442	0.020	0.183	0.014	0.433	0.098	orf6.4120;MRT4	(AL132717) putative 60S acidic ribosomal protein [Schizosacc	mRNA turnover	YKL009W	involved in mRNA decay	1.00E-92	molecular_function unknown
Contig4-2867_0011	RPS15	1.000	0.996	0.639	0.026	0.629	0.031	0.558	0.086	0.906	0.449	0.641	0.089	0.652	0.083	0.801	0.014	0.997	0.962	0.816	0.338	0.781	0.002	0.972	0.621	orf6.9110;RPS15	"Rig homolog [human, brain, Peptide Partial, 135 aa"	ribosomal protein	YOL040C	40S ribosomal protein S15 (S21) (rp52) (RIG protein)	5.00E-47	cytosolic small ribosomal (40S) subunit;structural protein of ribosome;protein biosynthesis
Contig4-2788_0008	KRR1	0.987	0.918	0.204	0.011	0.712	0.037	0.898	0.586	1.109	0.423	0.291	0.068	0.616	0.007	1.148	0.111	0.980	0.899	0.353	0.141	0.299	0.149	0.683	0.113	orf6.6554;orf6.254;KRR1	(AL031853) strong similarity to human Rev interacting protei	cell division and spore germination	YCL059C	involved in cell division and spore germination	1.00E-129	nucleolus;molecular_function unknown;ribosome biogenesis
Contig4-2833_0009	ERG2	0.996	0.953	0.500	0.011	0.719	0.117	0.894	0.283	1.092	0.563	0.817	0.496	0.798	0.380	1.188	0.519	0.863	0.729	0.426	0.028	0.227	0.008	0.591	0.047	orf6.3930;ERG2	C-8 sterol isomerase; Erg2p >gi:416962:sp:P32352:ERG2_YEAST	C-8 sterol isomerase	YMR202W	C-8 sterol isomerase	1.00E-66	endoplasmic reticulum;C-8 sterol isomerase;ergosterol biosynthesis
Contig4-2955_0022	RPA34	1.000	0.991	0.385	0.034	0.626	0.017	0.834	0.008	0.956	0.461	0.438	0.008	0.527	0.099	1.141	0.025	0.936	0.823	0.586	0.003	0.443	0.251	0.618	0.102	orf6.4232;RPA34	YJL148W;RPA34	RNA polymerase I subunit	YJL148W	unshared RNA polymerase I subunit	1.00E-18	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase I;transcription, from Pol I promoter"
Contig4-2821_0006	RPA43	0.975	0.888	0.433	0.121	0.876	0.688	0.963	0.885	0.913	0.502	0.497	0.131	0.498	0.179	0.730	0.086	0.973	0.888	0.611	0.000	0.454	0.042	0.697	0.006	orf6.4104;orf6.4103;RPA43	YOR340C;RPA43	RNA polymerase I subunit A43	YOR340C	DNA-dependent RNA polymerase I subunit A43	3.00E-50	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase I;transcription, from Pol I promoter"
Contig4-2722_0002	orf6.3387	0.994	0.947	0.407	0.048	0.735	0.247	0.871	0.021	0.977	0.507	0.636	0.231	0.616	0.188	0.977	0.711	0.930	0.808	0.506	0.088	0.432	0.063	0.516	0.019	orf6.3387;orf6.3388	YLR003C		YLR003C		3.00E-16	molecular_function unknown;biological_process unknown
Contig4-2576_0005	YER2	0.956	0.849	0.197	0.017	0.538	0.342	0.863	0.541	0.842	0.423	0.509	0.129	0.421	0.036	0.811	0.339	0.937	0.824	0.564	0.245	0.466	0.078	1.111	0.829	orf6.2076;YER2	Yer002wp >gi:731433:sp:P40007:YEJ2_YEAST HYPOTHETICAL 26.9 K	-	YER002W		6.00E-48	nucleolus;nucleus;molecular_function unknown;biological_process unknown
Contig4-3063_0012	orf6.7058	0.996	0.955	0.239	0.035	0.494	0.180	0.715	0.102	0.945	0.458	0.482	0.066	0.612	0.079	1.019	0.855	0.968	0.871	0.730	0.030	0.231	0.023	0.856	0.107	orf6.7058	YNL132W;KRE33		YNL132W		1.00E-180	molecular_function unknown;biological_process unknown
Contig4-3108_0092	orf6.8973	0.995	0.952	0.530	0.049	0.552	0.036	0.369	0.038	1.088	0.451	1.141	0.304	0.980	0.878	1.306	0.170	0.880	0.770	0.299	0.051	0.384	0.022	0.598	0.093	orf6.8973						
Contig4-2982_0008	orf6.8582	0.985	0.912	0.375	0.023	1.229	0.554	1.052	0.248	1.004	0.747	0.488	0.033	0.825	0.202	1.162	0.180	0.898	0.775	0.462	0.016	0.249	0.027	0.542	0.033	orf6.8582;orf6.8583	involved in ribosomal RNA processing; Lcp5p >gi:731512:sp:P4	involved in ribosomal RNA processing	YER127W	involved in ribosomal RNA processing	5.00E-48	small nucleolar ribonucleoprotein particle;small nuclear ribonucleoprotein;35S primary transcript processing;rRNA modification
Contig4-2896_0005	orf6.8672	0.998	0.969	0.430	0.057	0.915	0.157	1.002	0.987	1.180	0.423	0.443	0.015	0.562	0.165	1.136	0.435	0.989	0.928	0.350	0.059	0.315	0.070	0.506	0.063	orf6.8672;orf6.8670	Ygr128cp >gi:1723708:sp:P53276:YG38_YEAST HYPOTHETICAL 80.2		YGR128C		3.00E-25	molecular_function unknown;biological_process unknown
Contig4-2378_0001	YMC1	0.999	0.976	0.585	0.072	0.800	0.335	0.927	0.538	1.057	0.514	0.742	0.081	0.594	0.144	0.949	0.109	0.881	0.758	0.541	0.028	0.492	0.045	0.562	0.045	orf6.7260;YMC1	mitochondrial carrier protein; Ymc2p >gi:586784:sp:P38087:YM	mitochondrial carrier protein	YPR058W	putative mitochondrial carrier protein	8.00E-64	transport
Contig4-3003_0028	orf6.9005	0.987	0.918	0.401	0.029	0.810	0.023	1.040	0.804	0.956	0.444	0.245	0.014	0.794	0.144	0.965	0.556	0.952	0.851	0.495	0.022	0.461	0.096	0.673	0.247	orf6.9005	YNL282W;POP3	RNase P and RNase MRP subunit	YNL282W	RNase P and RNase MRP subunit	1.00E-10	ribonuclease MRP;ribonuclease P;ribonuclease MRP;ribonuclease P;rRNA processing;tRNA processing
Contig4-2347_0006	YFR1	0.995	0.950	0.253	0.014	0.755	0.275	0.825	0.225	0.943	0.507	0.472	0.125	0.850	0.221	0.895	0.098	0.950	0.840	0.385	0.021	0.515	0.326	0.626	0.003	orf6.6430;YFR1	(	-	YFR001W	Double-stranded RNA-binding protein	3.00E-35	
Contig4-3068_0024	orf6.3888	0.982	0.903	0.387	0.031	0.673	0.242	0.871	0.080	0.888	0.436	0.506	0.227	0.855	0.128	0.939	0.094	0.821	0.691	0.643	0.192	0.528	0.001	0.719	0.360	orf6.3888;orf6.223	YJL050W;MTR4	RNA helicase	YJL050W	RNA helicase	1.00E-50	nucleolus;ATP dependent RNA helicase;35S primary transcript processing
Contig4-3096_0006	YLR448	0.995	0.948	0.739	0.040	0.564	0.013	0.646	0.051	1.038	0.423	0.990	0.850	0.909	0.460	1.012	0.827	0.897	0.771	0.534	0.006	0.406	0.037	0.469	0.008	YLR448	YML073C;RPL6A	ribosomal protein	YML073C	Ribosomal protein L6A (L17A) (rp18) (YL16)	5.00E-54	cytosolic large ribosomal (60S) subunit;RNA binding;structural protein of ribosome;protein biosynthesis;ribosomal large subunit assembly and maintenance
Contig4-2357_0002	YOL77	0.988	0.920	0.253	0.024	0.590	0.002	0.753	0.165	0.985	0.669	0.603	0.140	0.718	0.216	0.945	0.400	0.983	0.908	0.481	0.037	0.253	0.005	0.451	0.061	orf6.7710;orf6.2436;YOL77	Yol077cp >gi:2132842:pir::S66770 probable membrane protein Y	-	YOL077C	Essential nucleolar protein required for biogenesis of the 60S ribosomal subunit\; homologue of BRIX (Biogenesis of ribosomes in Xenopus)	1.00E-106	molecular_function unknown;biological_process unknown
Contig4-2674_0010	YTM1	0.994	0.943	0.358	0.023	0.906	0.207	1.022	0.640	1.130	0.423	0.449	0.107	0.809	0.149	1.171	0.429	0.994	0.945	0.741	0.382	0.401	0.206	0.692	0.357	orf6.5221;YTM1	YOR272W;YTM1	microtubule function	YOR272W	microtubule-associated protein	1.00E-151	nucleus;cytoskeletal protein binding;cytoskeleton organization and biogenesis
Contig4-3031_0001	PCL2	0.972	0.879	0.648	0.033	0.416	0.012	0.579	0.106	0.948	0.454	0.490	0.150	1.270	0.297	0.913	0.269	0.978	0.893	0.355	0.003	0.540	0.013	0.486	0.037	orf6.6261;orf6.2813;orf6.6262;orf6.2812;PCL2	YDL127W;PCL2	S cyclin	YDL127W	G1 cyclin	2.00E-45	cell cycle
Contig4-2426_0003	YPR62	0.992	0.936	0.523	0.002	0.514	0.018	0.451	0.053	0.955	0.476	1.075	0.040	1.038	0.314	0.980	0.680	0.908	0.779	0.504	0.043	0.161	0.001	0.484	0.014	YPR62	CYTOSINE DEAMINASE (CYTOSINE AMINOHYDROLASE)	cytosine deaminase	YPR062W	cytosine deaminase	1.00E-27	cytosine deaminase
Contig4-2900_0027	EBP1	0.875	0.742	0.309	0.032	0.638	0.007	0.647	0.018	0.988	0.848	0.393	0.010	0.703	0.179	0.973	0.754	1.000	0.993	0.830	0.227	0.646	0.243	0.952	0.325	orf6.137;orf6.2607;EBP1	"Candida albicans estrogen-binding protein (EBP1) gene, compl"	estrogen binding protein	YHR052W		1.00E-14	26S proteasome;26S proteasome;protease substrate recruitment factor;protease substrate recruitment factor;protease substrate recruitment factor;protein degradation;protein degradation;protein degradation;protein degradation
Contig4-2086_0003	BUD5	1.000	no replicates	0.972	no replicates	0.876	no replicates	0.574	no replicates	2.259	0.430	0.622	0.558	0.343	0.157	0.461	0.093									orf6.1252;orf6.5609;BUD5	YCR038C;bud5	bud site selection	YCR038C	GTP\/GDP exchange factor for Rsr1 protein	1.00E-28	intracellular;RAS guanyl-nucleotide exchange factor;guanyl-nucleotide exchange factor;signal transducer;axial budding;bud site selection;polar budding;pseudohyphal growth;pseudohyphal growth;small GTPase mediated signal transduction
Contig4-2573_0003	YPT7	0.999	0.976	0.902	0.619	0.832	0.132	0.767	0.064	1.022	0.811	0.491	0.017	0.670	0.210	0.544	0.052	1.000	0.984	0.970	0.779	1.109	0.438	0.904	0.470	orf6.5702;YPT7;YOR359;YKL195;YHR194;CDC73;CAX12;CAX11;CAX10;CAX9;CAX8	C.albicans cosmid Ca49C1	GTP-binding protein				
Contig4-2740_0012	YGL144	0.993	0.939	1.014	0.890	1.158	0.395	1.346	0.193	1.029	0.785	0.418	0.071	0.699	0.002	0.807	0.169	0.989	0.924	0.887	0.438	1.150	0.117	0.951	0.734	orf6.7404;YGL144	YDL109C	-	YDL109C		5.00E-31	molecular_function unknown;biological_process unknown
Contig4-2085_0001	BUD6	1.000	no replicates	1.008	no replicates	1.206	no replicates	0.642	no replicates	0.949	0.593	0.992	0.982	0.434	0.035	0.651	0.077									orf6.6289;orf6.6288;BUD6	YLR319C;BUD6	actin-interacting protein	YLR319C	Actin Interacting Protein	1.00E-112	actin cap (sensu Saccharomyces);polarisome;cytoskeletal regulatory protein binding;RHO protein signal transduction;actin filament organization;bud site selection;bud site selection;cytokinesis;cytokinesis;establishment of cell polarity (sensu Saccharomyces);establishment of cell polarity (sensu Saccharomyces);osmotic response;polar budding
Contig4-1917_0008		0.997	0.960	0.928	0.724	0.715	0.002	0.818	0.320	0.982	0.939	0.286	0.025	0.959	0.897	0.449	0.045	0.997	0.960	1.182	0.627	1.169	0.032	1.541	0.066		"C.albicans CARE-1 gene, flanking DNA"					
Contig4-3009_0002	NOP1	0.991	0.932	0.914	0.707	0.798	0.245	0.882	0.376	1.078	0.456	0.671	0.230	0.499	0.120	1.040	0.784	0.960	0.855	0.715	0.019	0.695	0.258	0.816	0.529	orf6.5875;orf6.5874;NOP1	YDL014W;NOP1	nucleolar protein	YDL014W	"nucleolar protein, homologous to mammalian fibrillarin"	1.00E-128	box C+D snoRNP protein;small nuclear ribonucleoprotein;35S primary transcript processing;rRNA modification;ribosomal large subunit assembly and maintenance
Contig4-1877_0002	YOL132	0.987	0.921	0.746	0.449	1.024	0.142	0.917	0.802	1.124	0.429	0.469	0.155	0.415	0.142	0.387	0.000	0.997	0.964	1.116	0.856	1.523	0.136	1.266	0.310	orf6.2068;YOL132		surface glycoprotein				
Contig4-2941_0003	orf6.7546	0.988	0.925	1.175	0.328	1.041	0.624	0.929	0.807	1.130	0.507	0.578	0.344	0.518	0.015	0.926	0.216	0.892	0.854	3.449	0.245	1.591	0.046	1.643	0.046	orf6.7546	YPR181C;SEC23	cytoplasmic GTPase-activating protein	YPR181C	cytoplasmic GTPase-activating protein	1.00E-166	COPII vesicle coat;cytoplasm;GTPase activator;ER to Golgi transport;ER to Golgi transport
Contig4-2683_0009	YPR45	1.000	no replicates	0.623	no replicates	1.214	no replicates	0.507	no replicates	1.071	0.444	0.688	0.140	0.529	0.099	0.614	0.077	0.736	0.678	1.611	0.104	1.161	0.470	1.507	0.020	orf6.6030;YPR45	YPR045C	-	YPR045C		6.00E-29	molecular_function unknown;biological_process unknown
Contig4-3084_0013	POL1	0.989	0.923	0.730	0.054	1.009	0.723	0.964	0.462	0.999	0.977	0.348	0.013	1.047	0.886	0.990	0.969	1.000	0.985	0.605	0.108	0.581	0.172	0.563	0.094	orf6.9164;POL1	YNL102W;pol1	DNA polymerase	YNL102W	"DNA polymerase I alpha subunit, p180"	1.00E-180	"alpha DNA polymerase:primase complex;alpha DNA polymerase;DNA replication initiation;DNA replication, priming;lagging strand elongation"
Contig4-2663_0005	ARP5	0.995	0.948	1.047	0.260	1.029	0.734	1.004	0.974	0.979	0.423	0.843	0.527	0.614	0.008	0.741	0.397	0.835	0.737	1.469	0.002	1.508	0.053	1.553	0.033	orf6.7067;ARP5	YNL059C;ARP5	actin-related protein	YNL059C	Actin-related protein	1.00E-180	cell;molecular_function unknown;biological_process unknown
Contig4-2941_0014	orf6.7554	1.000	0.985	1.141	0.125	1.147	0.313	1.191	0.123	0.991	0.949	0.869	0.821	0.389	0.035	0.597	0.019	0.849	0.728	1.401	0.016	1.425	0.018	1.777	0.128	orf6.7554						
Contig4-2716_0005	PHX1	0.996	0.955	0.845	0.544	1.025	0.856	0.854	0.651	1.058	0.741	0.698	0.227	0.419	0.046	0.664	0.167	0.880	0.759	1.419	0.446	1.765	0.014	0.990	0.975	orf6.6653;PHX1	YOL068C;HST1	SIR2-like protein	YOL068C	Homolog of SIR2	5.00E-14	
Contig4-1510_0001	orf6.706	0.997	0.962	0.985	0.928	0.741	0.022	0.658	0.006	1.039	0.425	0.372	0.048	1.165	0.614	0.539	0.166	0.981	0.902	1.005	0.985	1.034	0.767	1.162	0.418	orf6.706						
Contig4-2177_0004	orf6.2401	0.999	0.975	0.956	0.675	0.879	0.279	0.821	0.416	1.045	0.599	0.737	0.290	0.533	0.053	0.887	0.492	0.922	0.812	1.995	0.030	1.618	0.050	1.553	0.028	orf6.2401						
Contig4-2861_0006	orf6.6704	0.997	0.962	0.851	0.171	0.737	0.043	0.677	0.379	0.994	0.889	0.784	0.583	0.409	0.026	0.983	0.894	0.966	0.872	1.290	0.107	1.206	0.187	0.905	0.297	orf6.6704						
Contig4-3083_0005	orf6.8054	0.999	0.976	0.587	0.327	0.735	0.199	0.616	0.016	0.926	0.570	0.665	0.679	0.504	0.011	1.509	0.191	0.989	0.927	0.550	0.005	0.455	0.082	0.760	0.020	orf6.8054;orf6.8055	YJL069C		YJL069C		1.00E-122	molecular_function unknown;biological_process unknown
Contig4-3096_0004	YML72	0.977	0.895	0.934	0.097	0.889	0.460	0.788	0.009	1.116	0.427	0.552	0.058	0.559	0.031	0.880	0.600	1.000	0.998	1.416	0.252	0.964	0.126	0.806	0.475	YML72		-				
Contig4-2236_0003	YME1	0.988	0.922	1.209	0.369	1.043	0.754	1.418	0.154	1.028	0.423	0.695	0.229	0.514	0.029	0.341	0.043	0.983	0.910	1.216	0.114	1.874	0.003	1.208	0.128	orf6.3007;YME1	(D16332) OSD1 gene product [Saccharomyces cerevisiae	mitochondrial protein	YPR024W	Mitochondrial member of the CDC48\/PAS1\/SEC18 family of ATPases	1.00E-180	mitochondrial inner membrane;ATP-dependent peptidase;mitochondrion organization and biogenesis
Contig4-1913_0001	orf6.6753	1.000	0.990	0.837	0.443	1.883	0.098	1.081	0.793	1.008	0.841	0.940	0.913	0.523	0.004	0.838	0.125	0.962	0.859	2.002	0.039	1.196	0.410	0.997	0.979	orf6.6753	(AL132964) putative protein [Arabidopsis thaliana					
Contig4-2788_0013	orf6.6553	0.994	0.947	0.831	0.248	0.840	0.475	0.772	0.140	0.907	0.543	0.401	0.003	0.676	0.110	1.098	0.748	0.963	0.868	1.133	0.453	1.385	0.213	1.748	0.069	orf6.6553	YER111C;SWI4	transcription factor	YER111C	transcription factor	8.00E-04	transcription factor;cell cycle
Contig4-3055_0009	orf6.2945	0.994	0.945	0.908	0.422	0.913	0.215	0.862	0.661	0.965	0.729	0.671	0.099	0.557	0.013	0.928	0.328	0.997	0.959	0.931	0.491	0.838	0.008	0.766	0.016	orf6.2945						
Contig4-2973_0006	orf6.7722	0.979	0.899	0.940	0.376	0.939	0.347	0.718	0.298	1.038	0.572	0.948	0.629	0.651	0.032	0.827	0.128	0.891	0.782	0.834	0.172	0.957	0.903	1.160	0.202	orf6.7722	YJL163C		YJL163C		2.00E-06	molecular_function unknown;biological_process unknown
Contig4-3063_0011	YNL129	1.000	0.988	1.048	0.877	1.100	0.713	0.845	0.481	0.954	0.690	0.871	0.443	0.572	0.019	0.899	0.053	0.851	0.737	1.371	0.155	1.288	0.014	1.638	0.078	orf6.7059;YNL129	YNL129W	-	YNL129W		2.00E-37	molecular_function unknown;biological_process unknown
Contig4-3037_0004	YHR6	0.980	0.898	0.875	0.168	0.839	0.173	0.727	0.322	1.015	0.878	0.719	0.378	0.626	0.010	0.683	0.157	0.877	0.768	1.656	0.023	1.702	0.066	1.361	0.017	orf6.9120;YHR6	YHR006W;STP2	-	YHR006W	Zinc finger (Cys(2)-His(2))	7.00E-34	molecular_function unknown;tRNA splicing
Contig4-2990_0011	orf6.4285	0.985	0.914	0.819	0.630	0.828	0.357	0.903	0.570	1.126	0.497	0.853	0.301	0.522	0.020	1.376	0.224	0.991	0.932	2.350	0.035	1.164	0.325	0.690	0.220	orf6.4285	Ybr141cp >gi:586549:sp:P38278:YBZ1_YEAST HYPOTHETICAL 38.5 K		YBR141C		7.00E-46	molecular_function unknown;biological_process unknown
Contig4-2072_0004	orf6.3202	0.994	0.944	0.647	0.092	0.832	0.135	0.929	0.008	1.104	0.593	0.749	0.166	0.580	0.066	1.074	0.339	0.981	0.902	0.832	0.165	0.811	0.229	1.091	0.183	orf6.3202	YDR280W;RRP45	Putative 3'->5' exoribonuclease\; component of exosome complex of 3'->5' exonucleases	YDR280W	Putative 3'->5' exoribonuclease\; component of exosome complex of 3'->5' exonucleases	6.00E-29	cytoplasmic exosome (RNase complex);nuclear exosome (RNase complex);3'-5' exoribonuclease;35S primary transcript processing;mRNA catabolism
Contig4-2808_0009	orf6.4242	0.999	0.984	0.841	0.086	0.994	0.956	0.857	0.039	1.101	0.457	0.869	0.723	0.496	0.100	0.578	0.096	0.917	0.802	1.402	0.143	1.279	0.033	1.511	0.057	orf6.4242	YBR136W;MEC1	"similar to phosphatidylinositol(PI)3-kinases required for DNA damage induced checkpoint responses in G1, S\/M, intra S, and G2\/M in mitosis"	YBR136W	"similar to phosphatidylinositol(PI)3-kinases required for DNA damage induced checkpoint responses in G1, S\/M, intra S, and G2\/M in mitosis"	4.00E-10	"cellular_component unknown;inositol/phosphatidylinositol kinase;DNA damage checkpoint;DNA recombination;DNA replication checkpoint;nucleobase, nucleoside, nucleotide and nucleic acid metabolism"
Contig4-3039_0007	MDM12	0.995	0.950	1.233	0.442	1.459	0.186	1.266	0.470	0.909	0.423	0.772	0.258	0.526	0.011	0.882	0.320	0.867	0.761	1.041	0.686	1.243	0.039	1.275	0.254	orf6.7164;MDM12	YOL009C;MDM12	mitochondrial morphology	YOL009C	Mdm12p is a mitochondrial outer membrane protein. An Mdm12p homolog exists in S. Pombe which confers a dominant negative phenotype when expressed in S. cerevisiae	3.00E-32	mitochondrial outer membrane;molecular_function unknown;mitochondrion inheritance;mitochondrion organization and biogenesis
Contig4-3065_0008	orf6.7496	0.994	0.947	0.765	0.632	1.097	0.868	1.016	0.957	1.130	0.423	0.786	0.384	0.608	0.037	1.161	0.138	0.976	0.890	0.811	0.244	0.763	0.437	0.942	0.645	orf6.7496						
Contig4-2916_0011	orf6.5100	0.994	0.947	1.134	0.500	1.139	0.331	0.949	0.758	1.039	0.499	1.122	0.597	0.706	0.001	1.275	0.366	0.986	0.918	0.664	0.207	0.771	0.408	0.865	0.511	orf6.5100						
Contig4-3040_0010	ENX3	0.988	0.922	0.734	0.114	1.037	0.857	0.994	0.980	1.055	0.471	0.481	0.046	0.727	0.027	0.552	0.029	0.977	0.892	1.425	0.345	1.186	0.171	1.420	0.137	orf6.3058;ENX3;CEF1	YMR213W;CEF1	pH signalling	YMR213W	Component of a protein complex associated with the splicing factor Prp19p.	5.00E-28	spliceosome;molecular_function unknown;mRNA splicing;mRNA splicing
Contig4-3002_0001	YBR257	0.992	0.935	0.728	0.158	0.936	0.128	1.297	0.162	1.180	0.423	0.447	0.021	0.547	0.018	1.085	0.720	0.983	0.908	0.790	0.119	0.701	0.008	0.780	0.362	orf6.3244;YBR257	YBR257W;POP4	-	YBR257W	protein component of RNase MRP and RNaseP	8.00E-18	ribonuclease MRP;ribonuclease P;ribonuclease MRP;ribonuclease P;rRNA processing;tRNA processing
Contig4-2690_0008	orf6.4465	0.902	0.771	0.694	0.067	0.612	0.070	0.737	0.135	0.962	0.737	0.940	0.782	0.548	0.035	0.845	0.287	0.987	0.921	0.971	0.582	1.100	0.639	1.010	0.902	orf6.4465;orf6.873						
Contig4-2970_0001	YLR63	0.984	0.912	0.808	0.313	1.008	0.844	1.169	0.609	1.006	0.886	0.790	0.559	0.523	0.085	1.308	0.204	0.999	0.983	0.916	0.788	0.584	0.082	0.747	0.041	orf6.4676;orf6.4680;YLR63;YGL157;YFL10;MSH4	(AL033503) conserved hypothetical protein [Candida albicans	protein kinase	YLR063W		1.00E-78	molecular_function unknown;biological_process unknown
Contig4-2764_0012	SPX35	0.997	0.962	1.315	0.102	1.176	0.429	1.296	0.341	0.931	0.487	0.848	0.226	0.575	0.012	0.892	0.301	0.991	0.931	1.329	0.169	1.201	0.373	1.457	0.283	orf6.3279;SPX35	Candida albicans RAPD marke	mitochondrial carrier protein	YOR130C	amino acid transporter	3.00E-20	mitochondrial membrane;ornithine transporter;arginine biosynthesis;nuclear migration (sensu Saccharomyces)
Contig4-3046_0019	RPL7	0.897	0.779	0.529	0.001	0.693	0.083	0.712	0.181	1.152	0.424	0.930	0.903	0.465	0.105	1.273	0.440	0.944	0.834	0.480	0.074	0.367	0.010	0.681	0.091	orf6.5257;RPL7;RLP7	YNL002C;RLP7	ribosomal protein	YNL002C	Protein with similarity to ribosomal proteins including Rpl6p	5.00E-38	
Contig4-3106_0026	orf6.8462	0.999	0.978	1.676	0.001	1.340	0.225	1.278	0.089	0.955	0.519	1.598	0.007	0.544	0.046	0.532	0.033	0.996	0.957	0.824	0.014	0.981	0.856	1.172	0.069	orf6.8462						
Contig4-1837_0007	YER67	0.998	0.966	9.096	0.038	7.094	0.058	6.198	0.115	1.102	0.453	0.377	0.053	0.472	0.051	0.420	0.113	0.990	0.930	0.960	0.872	0.540	0.210	0.676	0.033	orf6.1464;orf6.1218;YER67	YER067W	-	YER067W		8.00E-25	molecular_function unknown;biological_process unknown
Contig4-2388_0008	orf6.3614	0.993	0.938	0.949	0.855	0.986	0.876	0.919	0.627	0.902	0.486	0.792	0.478	0.484	0.046	0.848	0.210	0.766	0.651	1.170	0.231	1.378	0.315	1.132	0.564	orf6.3614	(AB012290) SRPK1 [Mus musculus	Serine Protein Kinase	YMR216C	Serine Protein Kinase	1.00E-139	protein kinase;biological_process unknown
Contig4-3091_0036	orf6.7943	0.970	0.876	0.675	0.003	0.460	0.095	0.630	0.189	0.955	0.549	0.337	0.008	2.237	0.003	1.114	0.464	0.982	0.908	0.793	0.308	0.736	0.036	0.761	0.024	orf6.7943	YML027W;YOX1	Homeobox-domain containing protein	YML027W	Homeobox-domain containing protein	7.00E-27	biological_process unknown
Contig4-2930_0014	orf6.4829	0.888	0.771	1.042	0.685	1.316	0.356	1.517	0.052	0.983	0.606	0.455	0.030	0.763	0.345	1.197	0.163	0.948	0.839	0.708	0.025	0.753	0.458	0.795	0.253	orf6.4829	(AF136181) potassium transporter [Kluyveromyces lactis	membrane protein\; low affinity potassium transport	YKR050W	membrane protein\; low affinity potassium transport	1.00E-37	transport
Contig4-2939_0001	orf6.1234	0.988	0.922	0.912	0.688	1.150	0.621	1.211	0.438	0.982	0.827	0.552	0.201	0.527	0.010	0.946	0.208	0.982	0.902	1.030	0.760	0.648	0.359	1.002	0.990	orf6.1234;orf6.1165	Yfl023wp >gi:1175932:sp:P43573:YFC3_YEAST HYPOTHETICAL 91.4		YFL023W		4.00E-34	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2838_0006		0.982	0.905	1.206	0.765	1.220	0.677	1.575	0.127	1.053	0.562	0.462	0.109	0.490	0.008	1.104	0.436	0.969	0.879	0.667	0.007	0.604	0.003	0.895	0.025							
Contig4-3063_0031	NHP2	0.991	0.933	0.628	0.283	0.712	0.226	0.788	0.015	1.169	0.465	1.056	0.764	0.596	0.058	1.389	0.260	0.939	0.821	0.812	0.290	0.596	0.032	0.485	0.081	orf6.6738;orf6.6737;NHP2	YDL208W;NHP2	high mobility group nuclear protein 2	YDL208W	HMG-like nuclear protein	2.00E-49	box H+ACA snoRNP protein;small nuclear ribonucleoprotein;35S primary transcript processing;rRNA modification
Contig4-3024_0032	CDC34	0.996	0.954	1.282	0.390	1.182	0.447	1.631	0.274	1.196	0.429	0.846	0.664	0.463	0.090	0.925	0.322	0.999	0.981	1.128	0.567	0.744	0.268	0.825	0.177	orf6.7631;CDC34	YDR054C;cdc34	ubiquitin conjugating enzyme	YDR054C	"ubiquitin-conjugating enzyme, E2"	1.00E-64	nuclear ubiquitin ligase complex;ubiquitin conjugating enzyme;ubiquitin-protein ligase;G1/S transition of mitotic cell cycle;G2/M transition of mitotic cell cycle;ubiquitin-dependent protein degradation
Contig4-3036_0022	orf6.8546	0.995	0.948	0.946	0.514	0.953	0.763	0.934	0.596	1.097	0.489	0.577	0.003	0.872	0.584	0.854	0.591	0.960	0.855	0.711	0.098	0.668	0.055	0.957	0.737	orf6.8546	YBR185C;MBA1	involved in assembly of mitochondrial respiratory complexes	YBR185C	involved in assembly of mitochondrial respiratory complexes	4.00E-16	respiration
Contig4-2958_0014	orf6.5855	0.961	0.867	0.976	0.776	0.820	0.032	0.851	0.406	1.033	0.524	1.155	0.166	0.525	0.019	0.874	0.368	0.963	0.868	0.607	0.354	0.432	0.106	0.515	0.118	orf6.5855;orf6.5854;orf6.5853						
Contig4-2461_0007	YER49	0.972	0.885	0.765	0.039	0.882	0.434	0.888	0.322	0.969	0.692	0.477	0.017	0.682	0.108	0.949	0.308	0.991	0.933	0.721	0.022	0.882	0.422	1.089	0.787	orf6.2234;YER49	(D83659) homology to Saccharomyces cerevisiae hypothetical p	-	YER049W		1.00E-119	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2886_0004	orf6.4078	0.988	0.923	0.553	0.266	0.694	0.241	0.961	0.865	1.008	0.826	0.643	0.415	0.500	0.016	0.794	0.294	0.891	0.780	0.927	0.765	1.081	0.639	1.518	0.120	orf6.4078	Yor287cp >gi:2132116:pir::S67189 hypothetical protein YOR287		YOR287C		3.00E-31	molecular_function unknown;biological_process unknown
Contig4-2875_0014	orf6.4219	0.997	0.960	0.894	0.270	0.964	0.868	0.950	0.751	1.013	0.564	0.708	0.167	0.643	0.008	1.235	0.338	0.986	0.919	1.046	0.422	0.905	0.578	1.067	0.690	orf6.4219						
Contig4-2550_0003	YLR222	0.987	0.918	0.531	0.085	0.688	0.115	0.892	0.091	1.092	0.582	0.810	0.702	0.627	0.014	0.979	0.935	0.978	0.898	0.759	0.259	0.625	0.155	0.845	0.142	orf6.3489;YLR222	"(Z99278) similar to WD domain, G-beta repeats (4 domains) [C"	beta-transducin-related protein	YLR222C		1.00E-180	molecular_function unknown;biological_process unknown
Contig4-2475_0001	orf6.4548	0.991	0.933	0.585	0.084	0.778	0.129	1.073	0.658	1.033	0.657	0.527	0.040	0.540	0.087	1.158	0.006	0.961	0.861	0.718	0.261	0.595	0.016	0.738	0.176	orf6.4548	(Z49909) similar to autoantigen PM-SCL; cDNA EST EMBL:D27557	involved in 5.8S rRNA processing	YOR001W	involved in 5.8S rRNA processing	5.00E-163	nuclear exosome (RNase complex);3'-5' exoribonuclease;35S primary transcript processing
Contig4-2628_0002	HSX2	0.953	0.853	0.670	0.173	0.853	0.455	0.906	0.530	0.962	0.555	0.640	0.406	0.519	0.054	0.816	0.020	0.992	0.939	0.671	0.175	0.708	0.171	0.840	0.134	orf6.6788;HSX2		alpha-adducin				
Contig4-3009_0025	TOP2	0.989	0.926	0.738	0.042	0.724	0.257	0.779	0.220	1.096	0.434	0.528	0.009	0.793	0.365	1.082	0.485	0.993	0.941	1.844	0.081	0.885	0.538	0.954	0.841	orf6.4382;TOP2	YNL088W;top2	DNA topoisomerase II	YNL088W	"topoisomerase II, Top2p localizes to axial cores in meiosis"	2.00E-09	nucleus;synaptonemal complex;DNA topoisomerase (ATP-hydrolyzing);DNA strand elongation;DNA topological change;chromatin assembly/disassembly;meiotic recombination;repression of recombination within rDNA repeats;repression of recombination within rDNA repeats
Contig4-3106_0072	YGR24	0.997	0.959	0.664	0.226	0.813	0.489	0.937	0.613	1.032	0.480	0.558	0.131	0.438	0.004	0.927	0.144	0.980	0.899	0.552	0.006	0.679	0.222	0.637	0.072	orf6.8490;YGR24	YGR024C	-	YGR024C		4.00E-75	molecular_function unknown;biological_process unknown
Contig4-3105_0012	YCL69	0.999	0.979	0.804	0.260	0.860	0.404	0.843	0.238	0.907	0.426	0.767	0.061	0.337	0.021	0.723	0.100	0.956	0.849	0.873	0.038	0.725	0.239	0.970	0.824	orf6.8902;YCL69;YMR88	YPR198W;sge1	MDR-like protein	YPR198W	Member of drug-resistance protein family	2.00E-31	transporter
Contig4-3108_0118	LTV1	0.999	0.983	0.533	0.374	0.738	0.477	0.935	0.740	1.001	0.987	0.316	0.055	0.577	0.041	0.870	0.081	0.983	0.910	0.748	0.104	0.453	0.069	0.793	0.018	orf6.8998;orf6.8999;LTV1	YKL143W;LTV1	low temperature survival	YKL143W	low temperature viability protein	1.00E-25	cellular_component unknown;molecular_function unknown;stress response
Contig4-2570_0003		0.962	0.867	0.973	0.846	1.073	0.217	0.949	0.782	1.075	0.458	0.807	0.442	0.664	0.003	0.824	0.301	0.998	0.966	0.763	0.094	0.860	0.176	0.816	0.112		YPR182W;SMX3	Sm or Sm-like snRNP protein	YPR182W	Sm or Sm-like snRNP protein	3.00E-04	mRNA splicing
Contig4-2892_0003	MSS116	0.998	0.969	0.567	0.319	0.951	0.853	0.891	0.578	1.105	0.505	0.384	0.024	0.580	0.043	0.906	0.132	0.998	0.968	1.092	0.740	0.975	0.884	1.086	0.716	orf6.3651;MSS116	(AB004535) ATP-DEPENDENT RNA HELICASE MSS116 PRECURSOR [Schi	RNA helicase	YDR194C	Mitochondrial DEAD box RNA helicase	2.00E-52	mitochondrial matrix;RNA helicase;RNA splicing
Contig4-2960_0011	RRT4	0.989	0.926	2.562	0.039	2.140	0.264	2.079	0.225	1.025	0.700	0.120	0.007	0.777	0.360	0.396	0.028	0.998	0.965	0.397	0.105	0.645	0.085	0.888	0.545	orf6.1756;RRT4	(reverse transcriptase	reverse transcriptase	YIL082W-A		7.00E-15	molecular_function unknown;biological_process unknown
Contig4-2954_0019	orf6.4960	0.998	0.968	0.715	0.149	0.642	0.027	0.749	0.028	1.442	0.423	0.879	0.460	0.440	0.097	0.795	0.086	0.995	0.949	0.535	0.030	0.725	0.049	0.577	0.114	orf6.4960						
Contig4-2836_0009	BET3	0.971	0.883	1.169	0.215	1.223	0.255	1.087	0.776	0.984	0.881	0.886	0.319	0.564	0.031	0.781	0.089	0.995	0.949	1.064	0.387	1.194	0.253	1.024	0.877	orf6.4042;BET3	(AF041432) bet3 [Homo sapiens] >gi:3413800:emb:CAA11902: (AJ	ER-golgi transport	YKR068C	transport protein particle (TRAPP) component	2.00E-55	
Contig4-2663_0006	YNA1	0.959	0.862	0.716	0.732	0.909	0.880	0.829	0.767	0.738	0.435	0.385	0.195	0.251	0.000	0.698	0.138	0.932	0.825	1.360	0.254	0.771	0.402	1.097	0.524	orf6.7070;orf6.7068;YNA1	YNL061W;NOP2	nucleolar protein	YNL061W	"90-kDa protein, located in nucleolus, that is homologous to a human proliferation-associated nucleolar protein, p120"	1.00E-175	nucleolus;RNA methyltransferase;rRNA processing
Contig4-2825_0012	YGL211	0.995	0.951	1.068	0.819	0.985	0.920	0.615	0.014	0.987	0.572	0.486	0.219	0.614	0.012	1.022	0.729	0.677	0.616	0.904	0.654	1.003	0.967	0.763	0.211	orf6.1840;YGL211	(AP000006) 320aa long hypothetical protein [Pyrococcus horik	-	YGL211W		1.00E-70	molecular_function unknown;biological_process unknown
Contig4-1712_0003	orf6.6306	0.999	0.975	0.595	0.232	0.828	0.320	0.710	0.340	1.036	0.743	0.651	0.313	0.411	0.007	1.051	0.520	0.887	0.767	0.641	0.221	0.664	0.222	0.876	0.581	orf6.6306	(AB004537) PROTEIN-TYROSINE PHOSPHATASE YVH1 [Schizosaccharo	nitrogen starvation-induced protein phosphatase	YIR026C	nitrogen starvation-induced protein phosphatase	1.00E-77	protein tyrosine phosphatase;meiosis;sporulation (sensu Saccharomyces)
Contig4-3072_0008	YKL40	0.975	0.888	1.109	0.305	1.310	0.218	1.190	0.553	1.184	0.424	1.016	0.955	0.470	0.004	0.750	0.364	0.964	0.869	2.093	0.026	0.828	0.283	0.647	0.073	orf6.7488;YKL40	YKL040C;NFU1	nifU-like protein	YKL040C	Nifu-like protein	3.00E-51	mitochondrial matrix;molecular_function unknown;iron homeostasis;iron homeostasis
Contig4-2894_0002	orf6.4998	0.988	0.921	2.756	0.001	2.205	0.039	1.671	0.012	1.146	0.629	0.961	0.860	0.548	0.013	1.171	0.084	0.581	0.529	0.304	0.025	0.264	0.015	0.290	0.014	orf6.4998;orf6.280;orf6.4997;orf6.279						
Contig4-2078_0005	CSL4	0.992	0.937	0.676	0.192	0.817	0.115	0.850	0.361	1.090	0.539	1.162	0.308	0.632	0.014	1.011	0.928	0.998	0.967	0.596	0.009	0.482	0.022	0.605	0.102	orf6.647;orf6.512;CSL4	YNL232W;CSL4	-	YNL232W	Involved in kinetochore-related function	3.00E-45	cytoplasmic exosome (RNase complex);nuclear exosome (RNase complex);3'-5' exoribonuclease;35S primary transcript processing;mRNA catabolism
Contig4-2993_0006	YKL172	0.995	0.951	0.532	0.262	0.769	0.337	1.025	0.955	1.084	0.541	0.601	0.266	0.453	0.062	1.172	0.096	0.988	0.922	0.524	0.018	0.365	0.100	0.852	0.012	orf6.2953;YKL172	Nucleolar protein; Ebp2p >gi:549736:sp:P36049:YKR2_YEAST HYP	nucleolar protein	YKL172W	Nucleolar protein	1.00E-80	nucleolus;molecular_function unknown;rRNA processing
Contig4-3098_0040	orf6.7779	0.998	0.968	1.306	0.344	1.159	0.644	1.046	0.891	1.000	1.000	1.228	0.288	0.596	0.023	1.037	0.616	0.932	0.817	0.532	0.016	0.499	0.012	0.541	0.052	orf6.7779	YDR485C		YDR485C		7.00E-04	molecular_function unknown;biological_process unknown
Contig4-2835_0001	NIP7	0.991	0.933	0.674	0.538	0.780	0.601	1.047	0.394	1.042	0.703	0.388	0.132	0.430	0.043	1.136	0.152	0.995	0.953	0.505	0.002	0.499	0.024	0.526	0.063	orf6.4981;NIP7	(AL022245) putative ribosome biogenesis protein [Schizosacch	ribosome assembly	YPL211W	involved in ribosome biogenesis	8.00E-85	cytosolic large ribosomal (60S) subunit;nucleolus;protein binding;rRNA processing;ribosomal large subunit assembly and maintenance
Contig4-2882_0015	orf6.3417	0.997	0.962	0.931	0.395	0.841	0.179	1.015	0.705	1.024	0.423	0.610	0.098	0.567	0.078	0.912	0.370	0.991	0.936	0.740	0.102	0.749	0.205	0.753	0.076	orf6.3417						
Contig4-2760_0003	orf6.6784	0.995	0.953	0.629	0.084	0.933	0.431	1.065	0.022	1.183	0.439	0.697	0.088	0.650	0.018	1.110	0.613	0.983	0.910	1.477	0.449	0.711	0.334	0.928	0.733	orf6.6784						
Contig4-2738_0007	orf6.1624	0.965	0.871	1.322	0.251	1.156	0.403	1.668	0.350	1.085	0.433	0.932	0.641	0.629	0.060	0.854	0.532	0.894	0.767	0.969	0.950	0.906	0.634	0.948	0.880	orf6.1624;orf6.3841	YKR062W;TFA2	Small subunit of TFIIE transcription factor	YKR062W	Small subunit of TFIIE transcription factor	5.00E-51	"transcription factor TFIIE;general RNA polymerase II transcription factor;transcription initiation, from Pol II promoter"
Contig4-2438_0013	orf6.6930	0.983	0.911	1.899	0.020	1.868	0.015	1.312	0.155	1.107	0.424	1.032	0.856	0.550	0.003	0.778	0.056	0.998	0.966	1.785	0.013	1.557	0.204	1.138	0.493	orf6.6930						
Contig4-3015_0021	YNT20	0.994	0.945	0.684	0.431	0.597	0.173	0.770	0.394	0.995	0.896	0.792	0.338	0.451	0.116	0.796	0.298	0.982	0.905	0.972	0.938	0.707	0.015	0.759	0.123	orf6.7107;YNT20	YLR059C;REX2	YME2 suppressor	YLR059C	RNA exonuclease	3.00E-51	mitochondrion;mitochondrion;3'-5' exonuclease;3'-5' exonuclease;RNA processing
Contig4-2970_0018	YLR63	0.997	0.958	0.807	0.331	0.827	0.666	0.755	0.352	1.107	0.437	0.284	0.014	0.244	0.024	1.001	0.994	0.989	0.926	1.032	0.899	0.920	0.585	0.322	0.023	orf6.4685;orf6.3597;YLR63;YGL157;YFL10;OPT1;MSH4	(D83992) ISP4 [Schizosaccharomyces pombe	protein kinase	YJL212C	"Oligopeptide transporter\; Opt1p transports tetra- and pentapeptides, including the endogenous opioid pentapeptide leucine enkephalin."	8.00E-49	oligopeptide transporter;transport
Contig4-3102_0022	YDR45	0.985	0.915	0.602	0.212	0.969	0.931	0.974	0.931	1.067	0.713	0.627	0.313	0.437	0.004	0.846	0.006	0.973	0.886	1.023	0.863	0.737	0.149	1.067	0.603	orf6.8349;YDR45	TFIIS-like small Pol III subunit C11; Rpc11p >gi:3334319:sp	-	YDR045C	TFIIS-like small Pol III subunit C11	7.00E-47	"DNA-directed RNA polymerase III;DNA-directed RNA polymerase III;transcription, from Pol III promoter"
Contig4-2626_0005	YER67	0.997	0.964	10.441	0.032	8.307	0.008	8.546	0.024	1.194	0.451	0.320	0.084	0.374	0.097	0.280	0.001	0.997	0.963	0.531	0.033	0.608	0.073	0.655	0.166	orf6.1218;orf6.1464;YER67	YER067W	-	YER067W		4.00E-29	molecular_function unknown;biological_process unknown
Contig4-3108_0100	orf6.8982	0.962	0.867	0.709	0.039	0.520	0.046	0.580	0.048	1.019	0.597	0.295	0.041	1.623	0.061	1.009	0.906	0.924	0.813	0.893	0.541	0.759	0.183	0.730	0.299	orf6.8982;orf6.8981	YDL003W;MCD1	"involved in mitosis, similar to pombe Rad21"	YDL003W	"involved in mitosis, similar to pombe Rad21"	6.00E-04	cohesin;molecular_function unknown;mitotic chromosome condensation;mitotic sister chromatid cohesion;mitotic sister chromatid cohesion
Contig4-3108_0080	YOR145	0.965	0.871	0.396	0.143	0.607	0.278	0.687	0.174	1.091	0.423	0.499	0.020	0.609	0.017	1.112	0.529	0.969	0.880	0.723	0.045	0.500	0.030	0.825	0.118	orf6.8966;YOR145	YOR145C	-	YOR145C		1.00E-94	cytoplasm;molecular_function unknown;biological_process unknown
Contig4-2960_0014	orf6.3517	0.900	0.791	1.527	0.178	1.157	0.692	1.112	0.713	0.936	0.556	0.900	0.435	0.523	0.036	0.863	0.390	0.996	0.957	1.085	0.761	0.976	0.890	1.192	0.210	orf6.3517;orf6.1758	(AB016765) 3-phosphoshikimate 1-carboxyvinyltransferase [Ory	"pentafunctional arom polypeptide (contains: 3-dehydroquinate synthase, 3-dehydroquinate dehydratase (3-dehydroquinase), shikimate 5-dehydrogenase, shikimate kinase, and epsp synthase)"	YDR127W	"pentafunctional arom polypeptide (contains: 3-dehydroquinate synthase, 3-dehydroquinate dehydratase (3-dehydroquinase), shikimate 5-dehydrogenase, shikimate kinase, and epsp synthase)"	1.00E-180	3-dehydroquinate dehydratase
Contig4-2912_0005	orf6.3820	0.990	0.928	0.724	0.106	0.868	0.676	0.909	0.586	1.017	0.749	0.863	0.615	0.490	0.039	1.098	0.298	0.883	0.770	0.898	0.597	0.962	0.909	1.584	0.088	orf6.3820	"<a href = \http://expasy.cbr.nrc.ca/cgi-bin/nicezyme.pl?2.7.7.6\>2.7.7.6</a>          subunit common to RNA polymerases I, II, an"	"subunit common to RNA polymerases I, II, and III"	YPR187W	"subunit common to RNA polymerases I, II, and III"	2.00E-54	"DNA-directed RNA polymerase I;DNA-directed RNA polymerase II, core;DNA-directed RNA polymerase III;DNA-directed RNA polymerase I;DNA-directed RNA polymerase II;DNA-directed RNA polymerase III;transcription, from Pol I promoter;transcription, from Pol II promoter;transcription, from Pol II promoter;transcription, from Pol III promoter"
Contig4-3102_0027	YNL313	0.893	0.765	0.528	0.362	0.742	0.307	0.775	0.604	1.279	0.475	0.494	0.056	0.536	0.072	1.369	0.275	0.976	0.887	1.183	0.549	0.503	0.138	0.609	0.112	orf6.8345;YNL313	Ynl313cp >gi:1176586:sp:P42842:YN53_YEAST HYPOTHETICAL 102.3	-	YNL313C		1.00E-180	molecular_function unknown;biological_process unknown
Contig4-2911_0006	orf6.5236	0.989	0.924	0.524	0.354	0.718	0.482	0.952	0.808	0.845	0.430	0.287	0.039	0.701	0.065	1.076	0.541	0.996	0.957	0.700	0.041	0.641	0.023	0.853	0.054	orf6.5236;orf6.718	YLR068W;FYV7		YLR068W		4.00E-11	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-3106_0053	orf6.8476	0.997	0.964	0.905	0.343	0.866	0.389	0.620	0.223	1.005	0.936	0.416	0.030	0.236	0.006	0.285	0.003	0.984	0.909	0.996	0.979	1.292	0.432	0.875	0.585	orf6.8476	YOL152W;FRE7	similar to FRE2	YOL152W	similar to FRE2	1.00E-48	molecular_function unknown;biological_process unknown
Contig4-2539_0012	orf6.503	0.997	0.963	0.885	0.494	0.946	0.478	0.975	0.757	1.142	0.428	0.637	0.037	0.676	0.013	1.283	0.328	0.992	0.935	0.661	0.207	0.468	0.051	0.736	0.404	orf6.503	YDR367W		YDR367W		2.00E-19	molecular_function unknown;biological_process unknown
Contig4-2910_0009	CDC5	0.961	0.862	0.820	0.350	0.895	0.539	0.684	0.142	1.082	0.428	0.378	0.213	0.626	0.032	1.380	0.150	0.997	0.964	0.596	0.070	0.623	0.220	0.841	0.094	orf6.5090;CDC5	(D21099) STK-1 [Mus musculus	protein kinase	YMR001C	protein kinase which functions at the G(sub)2\/M boundary	1.00E-180	"cytoplasm;spindle pole body;protein serine/threonine kinase;DNA dependent DNA replication;exit, from mitosis;protein amino acid phosphorylation"
Contig4-3016_0015	CDC60	0.999	0.974	0.748	0.003	1.099	0.470	1.186	0.112	1.027	0.452	0.563	0.006	0.687	0.053	1.028	0.886	0.993	0.940	1.001	0.995	0.780	0.458	0.682	0.299	orf6.3812;CDC60	YMR268C;PRP24	leucyl-tRNA synthetase	YMR268C	U4\/U6 snRNP protein	6.00E-24	spliceosome;pre-mRNA splicing factor;snRNP recycling;spliceosome assembly
Contig4-2196_0001	orf6.2639	0.998	0.969	0.654	0.062	0.939	0.532	1.212	0.112	0.925	0.484	0.396	0.028	0.608	0.061	1.017	0.736	0.999	0.978	0.660	0.479	0.964	0.877	1.170	0.517	orf6.2639;orf6.273	(rDNA transcription factor CF subunit	component of rDNA transcription factor	YML043C	component of rDNA transcription factor	2.00E-22	"RNA polymerase I transcription factor complex;RNA polymerase I transcription factor;transcription, from Pol I promoter"
Contig4-2877_0013	orf6.3730	0.955	0.856	0.754	0.497	0.695	0.340	0.885	0.448	1.016	0.515	0.359	0.066	0.643	0.029	0.967	0.318	0.927	0.807	0.818	0.528	0.760	0.327	0.909	0.273	orf6.3730;orf6.3731						
Contig4-2939_0012	YNR54	0.994	0.946	1.180	0.764	0.818	0.562	1.176	0.434	0.972	0.583	0.805	0.300	0.541	0.016	0.851	0.210	0.888	0.780	0.789	0.042	0.810	0.393	1.078	0.580	orf6.1667;orf6.1772;YNR54	(AL031261) conserved hypothetical protein [Schizosaccharomyc	-	YNR054C		9.00E-64	molecular_function unknown;biological_process unknown
Contig4-3106_0065	YBR261	0.944	0.839	0.481	0.173	0.714	0.468	0.669	0.266	1.127	0.454	0.725	0.498	0.518	0.021	0.952	0.183	0.851	0.737	0.770	0.509	0.767	0.514	1.061	0.756	orf6.8484;orf6.8483;YBR261	YBR261C	-	YBR261C		8.00E-79	molecular_function unknown;biological_process unknown
Contig4-3063_0030	NHP2	0.967	0.870	0.601	0.048	0.700	0.317	0.691	0.151	1.021	0.712	0.940	0.490	0.512	0.011	1.107	0.247	0.910	0.801	0.940	0.666	0.608	0.334	0.835	0.262	orf6.6738;orf6.6737;NHP2		high mobility group nuclear protein 2				
Contig4-2473_0003	YHL13	0.916	0.807	0.705	0.342	0.702	0.423	0.849	0.669	1.121	0.426	0.802	0.523	0.451	0.035	1.087	0.103	0.886	0.777	0.979	0.951	0.516	0.005	0.660	0.077	orf6.4080;YHL13	Yhl013cp >gi:731597:sp:P38747:YHB3_YEAST HYPOTHETICAL 36.1 K	-	YHL013C		3.00E-62	molecular_function unknown;biological_process unknown
Contig4-2369_0001	orf6.4769	0.991	0.934	2.593	0.035	1.215	0.596	0.920	0.369	1.110	0.516	0.901	0.756	0.488	0.015	0.466	0.049	0.958	0.852	1.126	0.639	0.707	0.279	0.960	0.620	orf6.4769;orf6.4773;orf6.4026;orf6.4772	(AF007776) GAG protein [Candida albicans] >gi:3273717 (AF050					
Contig4-2997_0025	DYS1	0.993	0.942	0.750	0.145	0.785	0.111	0.911	0.408	1.068	0.481	0.834	0.455	0.610	0.059	0.965	0.086	0.998	0.966	0.764	0.018	0.456	0.027	0.723	0.134	orf6.6446;DYS1	(AP000006) 342aa long hypothetical deoxyhypusine synthase [P	deoxyhypusine synthase	YHR068W	Deoxyhypusine synthase	1.00E-170	deoxyhypusine synthase
Contig4-1346_0001	DOT4	0.993	0.942	0.518	0.115	0.704	0.089	0.695	0.264	1.003	0.585	0.432	0.165	0.522	0.016	0.866	0.279	0.992	0.935	0.572	0.005	0.514	0.064	0.815	0.045	orf6.2580;orf6.2890;DOT4	predicted to encode a ubiquitin-processing protease; Ubp10p	telomere silencing	YNL186W	predicted to encode a ubiquitin-processing protease	9.00E-67	nucleus;ubiquitin-specific protease;deubiquitylation
Contig4-3083_0028	YHR88	0.951	0.850	0.537	0.298	0.790	0.358	1.419	0.023	1.129	0.423	0.261	0.073	0.434	0.082	1.012	0.938	0.989	0.926	0.713	0.156	0.434	0.143	0.731	0.300	orf6.1627;orf6.5567;YHR88	YHR088W;RPF1	-	YHR088W		3.00E-86	molecular_function unknown;biological_process unknown
Contig4-3107_0047	orf6.8757	0.990	0.931	0.674	0.026	0.676	0.153	0.912	0.379	0.998	0.926	0.622	0.223	0.511	0.081	0.706	0.163	0.986	0.915	1.107	0.675	1.036	0.730	1.080	0.801	orf6.8757						
Contig4-2912_0012	orf6.3824	0.998	0.971	0.892	0.500	0.941	0.811	1.022	0.945	0.978	0.473	0.462	0.015	0.893	0.432	0.936	0.627	0.986	0.918	0.627	0.055	0.852	0.022	0.882	0.385	orf6.3824						
Contig4-2982_0009	orf6.8584	0.985	0.913	0.479	0.407	0.785	0.462	0.834	0.474	0.853	0.439	0.199	0.030	0.315	0.011	0.629	0.096	0.963	0.868	0.629	0.335	0.323	0.193	0.772	0.432	orf6.8584;orf6.8558	(AJ012409) hypothetical protein [Homo sapiens		YER126C		1.00E-124	nucleus;molecular_function unknown;biological_process unknown
Contig4-3045_0015	YOR6	0.998	0.967	0.827	0.289	1.311	0.354	1.270	0.094	1.034	0.624	0.475	0.037	0.663	0.053	1.064	0.675	0.993	0.940	0.805	0.376	0.564	0.227	0.736	0.282	orf6.6636;orf6.6637;YOR6	YOR006C	-	YOR006C		1.00E-102	molecular_function unknown;biological_process unknown
Contig4-2961_0022	orf6.3935	0.970	0.881	0.566	0.327	0.806	0.388	0.985	0.703	1.130	0.480	0.385	0.098	0.329	0.021	1.112	0.403	0.985	0.914	0.566	0.233	0.318	0.091	0.603	0.019	orf6.3935	YAL059W;ECM1	putative transmembrane domain protein involved in cell wall biogenesis	YAL059W	putative transmembrane domain protein involved in cell wall biogenesis	5.00E-10	molecular_function unknown
Contig4-3105_0069	CUS1	0.999	0.976	1.421	0.084	1.002	0.986	1.183	0.499	1.036	0.462	0.558	0.007	0.859	0.358	1.043	0.566	1.000	0.985	0.618	0.111	1.173	0.589	1.006	0.792	orf6.8929;orf6.8930;CUS1	YMR240C;CUS1	spliceosome associated protein	YMR240C	U2 snRNP protein	1.00E-39	mRNA splicing
Contig4-3085_0030	YOR56	0.950	0.846	0.558	0.547	0.832	0.776	1.090	0.855	0.865	0.446	0.321	0.232	0.350	0.015	0.899	0.292	0.977	0.892	0.756	0.305	0.385	0.026	0.940	0.815	orf6.7341;orf6.7340;YOR56	YOR056C	-	YOR056C		5.00E-78	molecular_function unknown;biological_process unknown
Contig4-2720_0001	orf6.2810	0.981	0.902	0.864	0.440	0.643	0.055	0.705	0.153	1.125	0.433	0.452	0.010	1.410	0.149	0.809	0.364	0.951	0.851	0.717	0.483	0.678	0.083	0.549	0.046	orf6.2810;orf6.577	YBL023C;mcm2	"Minichromosome maintenance protein, transcription factor"	YBL023C	"Minichromosome maintenance protein, transcription factor"	1.00E-180	cytoplasm;pre-replicative complex;replication fork;ATP dependent DNA helicase;chromatin binding;DNA replication initiation;DNA unwinding;pre-replicative complex formation and maintenance;pre-replicative complex formation and maintenance
Contig4-2840_0004	RPC25	0.998	0.972	0.626	0.163	1.057	0.402	1.249	0.034	1.095	0.589	0.698	0.260	0.627	0.003	0.974	0.620	0.984	0.913	0.687	0.056	0.526	0.024	0.522	0.092	orf6.6512;RPC25	(AL033385) dna-directed rna polymerase iii subunit [Schizosa	RNA polymerase III subunit	YKL144C	Subunit of RNA polymerase III	4.00E-57	"DNA-directed RNA polymerase III;DNA-directed RNA polymerase III;transcription, from Pol III promoter"
Contig4-3060_0002	YGR280	0.982	0.904	0.785	0.231	0.904	0.060	1.044	0.635	0.972	0.656	0.254	0.002	0.645	0.086	0.914	0.605	0.999	0.978	0.492	0.107	0.413	0.086	0.678	0.038	orf6.7526;orf6.7525;YGR280	YGR280C	-	YGR280C		5.00E-60	molecular_function unknown;biological_process unknown
Contig4-2846_0001	YLR9	0.993	0.940	0.458	0.261	0.553	0.308	1.027	0.749	0.792	0.436	0.300	0.009	0.326	0.018	0.773	0.120	0.978	0.895	0.856	0.459	0.437	0.022	1.153	0.546	orf6.3648;YLR9	YLR009W	ribosomal protein L24B	YLR009W		2.00E-56	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2868_0013	orf6.2685	0.999	0.973	0.941	0.538	0.991	0.838	0.801	0.195	1.079	0.445	0.486	0.061	0.777	0.107	1.030	0.283	0.991	0.932	0.929	0.318	0.950	0.891	0.900	0.541	orf6.2685	(D90916) helicase of the snf2/rad54 family [Synechocystis sp	"helicase related protein, snf2 homolog"	YIL126W	"helicase related protein, snf2 homolog"	1.00E-180	nucleus;DNA helicase;adenosinetriphosphatase;chromatin modeling;meiosis
Contig4-3106_0005	orf6.8449	0.999	0.979	1.139	0.400	1.019	0.921	0.843	0.206	1.206	0.426	1.097	0.565	0.636	0.013	0.754	0.199	0.969	0.874	0.517	0.036	0.375	0.047	0.516	0.054	orf6.8449						
Contig4-3097_0060	orf6.8061	0.992	0.934	1.069	0.648	0.889	0.703	0.779	0.286	1.022	0.841	0.931	0.826	0.594	0.021	0.900	0.423	0.964	0.870	0.712	0.098	0.700	0.069	0.634	0.264	orf6.8061	YPL237W;SUI3	beta subunit of translation initiation factor eIF-2	YPL237W	beta subunit of translation initiation factor eIF-2	6.00E-64	ribosome;translation initiation factor;protein synthesis initiation
Contig4-2416_0002	DIC1	0.987	0.918	0.916	0.606	1.280	0.447	1.208	0.227	1.092	0.429	0.629	0.037	0.527	0.001	0.903	0.587	0.996	0.953	0.468	0.088	0.433	0.030	0.674	0.045	orf6.4787;DIC1	(AJ223355) mitochondrial dicarboxylate carrier [Rattus norve	mitochondrial dicarboxylate transport	YLR348C	mitochondrial dicarboxylate transport protein	2.00E-84	mitochondrial membrane;dicarboxylic acid transporter;dicarboxylic acid transporter;dicarboxylic acid transport;dicarboxylic acid transport
Contig4-3102_0054	GAL4	0.974	0.884	1.079	0.685	1.412	0.112	1.220	0.205	1.105	0.430	0.615	0.015	0.666	0.040	0.646	0.081	0.979	0.900	0.494	0.053	0.752	0.042	0.509	0.046	orf6.8327;GAL4	(galactose gene transcription	galactose gene transcription	YPL248C	zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type	4.00E-21	nucleus;transcriptional activator;galactose metabolism;transcription regulation
Contig4-3019_0024	CKB2	0.994	0.945	0.818	0.160	0.827	0.222	0.795	0.123	1.070	0.426	0.667	0.023	0.656	0.018	0.809	0.034	0.998	0.970	0.919	0.391	0.774	0.211	0.758	0.013	orf6.4602;orf6.5189;orf6.4603;CKB2	YOR039W;CKB2	casein kinase II beta subunit	YOR039W	"Casein kinase II, beta' subunit"	5.00E-69	"casein kinase II;casein kinase II;G1/S transition of mitotic cell cycle;G2/M transition of mitotic cell cycle;establishment of cell polarity (sensu Saccharomyces);flocculation;ion homeostasis;protein amino acid phosphorylation;protein amino acid phosphorylation;transcription regulation, from Pol I promoter;transcription regulation, from Pol I promoter;transcription regulation, from Pol III promoter"
Contig4-2611_0010	orf6.5912	0.989	0.926	0.969	0.756	1.118	0.706	1.228	0.167	1.031	0.656	0.417	0.002	0.842	0.077	0.906	0.590	0.988	0.924	0.918	0.715	0.843	0.235	1.135	0.491	orf6.5912	YLR069C;MEF1	mitochondrial elongation factor G-like protein	YLR069C	mitochondrial elongation factor G-like protein	1.00E-180	mitochondrion;translation elongation factor;translation elongation factor;protein synthesis elongation;protein synthesis elongation
Contig4-2964_0003	orf6.4027	0.998	0.971	2.042	0.043	1.535	0.453	1.721	0.200	1.170	0.547	0.378	0.063	0.912	0.689	0.936	0.659	0.992	0.938	0.856	0.281	0.960	0.807	0.781	0.290	orf6.4027;orf6.6008;orf6.4770	YJL113W	"The TyB Gag-Pol protein. Gag processing produces capsid proteins. Pol is cleaved to produce protease, reverse transcriptase, and integrase activities."	YJL113W	"The TyB Gag-Pol protein. Gag processing produces capsid proteins. Pol is cleaved to produce protease, reverse transcriptase, and integrase activities."	8.00E-24	molecular_function unknown;biological_process unknown
Contig4-2780_0010	RNA11	0.998	0.967	0.920	0.427	0.906	0.468	1.161	0.425	0.986	0.771	0.873	0.202	0.629	0.018	0.857	0.156	0.992	0.936	0.897	0.321	0.882	0.486	0.891	0.636	orf6.3186;RNA11	(Z68297) Similarity to Human splicosome-associated protein S	RNA processing	YDL043C	snRNA-associated protein	1.00E-25	mRNA splicing
Contig4-2838_0010	orf6.1892	0.994	0.946	0.932	0.214	0.933	0.231	1.059	0.651	0.915	0.424	0.437	0.015	0.586	0.100	0.982	0.750	0.984	0.909	0.509	0.016	0.447	0.064	0.603	0.057	orf6.1892	(regulation of rRNA processing	Protein with a domain similar to the fork head DNA-binding domain found in the developmental fork head protein of Drosophila melanogaster and in the HNF-3 family of hepatocyte mammalian transcription factors.	YPR104C	Protein with a domain similar to the fork head DNA-binding domain found in the developmental fork head protein of Drosophila melanogaster and in the HNF-3 family of hepatocyte mammalian transcription factors.	2.00E-35	"nucleus;transcription factor;rRNA processing;transcription, from Pol III promoter"
Contig4-2092_0004	CYP1	0.979	0.899	1.233	0.154	1.087	0.346	1.200	0.128	0.964	0.773	0.723	0.263	0.559	0.020	0.674	0.152	0.995	0.947	1.024	0.817	1.062	0.192	1.019	0.912	orf6.6410;orf6.6408;orf6.6409;orf6.2216;orf6.2215;CYP1	YML078W;CPR3	peptidyl proline isomerase	YML078W	cyclophilin-3 (cyclosporin-sensitive proline rotamase-3)	6.00E-57	mitochondrion;peptidyl-prolyl isomerase;protein folding
Contig4-2931_0004	orf6.7910	0.997	0.959	0.926	0.621	1.051	0.550	1.166	0.094	1.116	0.466	0.768	0.232	0.621	0.032	0.912	0.440	0.973	0.886	0.771	0.037	0.836	0.532	0.908	0.467	orf6.7910	YHL011C;PRS3	ribose-phosphate pyrophosphokinase 3	YHL011C	ribose-phosphate pyrophosphokinase 3	1.00E-114	cytoplasm;ribose-phosphate pyrophosphokinase;`de novo` IMP biosynthesis;`de novo` pyrimidine biosynthesis;histidine biosynthesis;purine salvage;tryptophan biosynthesis
Contig4-3106_0069	orf6.8488	0.974	0.888	1.127	0.120	0.790	0.229	0.859	0.467	1.010	0.850	0.561	0.021	1.118	0.494	0.760	0.131	0.956	0.854	0.805	0.345	1.038	0.831	0.541	0.007	orf6.8488	YOL146W		YOL146W		2.00E-37	molecular_function unknown;biological_process unknown
Contig4-3087_0037	FAS2	0.999	0.974	0.714	0.047	0.696	0.276	1.024	0.748	1.090	0.450	0.466	0.031	0.674	0.330	0.786	0.133	0.974	0.884	0.447	0.107	0.643	0.080	0.958	0.351	orf6.9089;orf6.9088;FAS2	YPL231W;FAS2	fatty acid synthase alpha subunit	YPL231W	alpha subunit of fatty acid synthase	1.00E-180	fatty-acid synthase complex;3-oxoacyl-[acyl-carrier protein] reductase;3-oxoacyl-[acyl-carrier protein] synthase;fatty acid biosynthesis
Contig4-2902_0018	HTA1	0.960	0.863	1.124	0.498	0.640	0.355	0.502	0.060	0.830	0.432	0.563	0.212	0.251	0.004	0.705	0.339	0.832	0.736	0.289	0.012	0.548	0.005	0.513	0.194	orf6.7310;orf6.2007;HTA1;HTA2	(AB001052) histone H2A-like protein [Bombyx mori	histone 2A	YDR225W	Histone H2A (HTA1 and HTA2 code for nearly identical proteins)	5.00E-53	nucleosome
Contig4-2647_0003	orf6.2127	0.997	0.960	0.741	0.051	0.840	0.155	1.044	0.465	0.925	0.532	0.703	0.147	0.448	0.027	1.040	0.487	0.997	0.959	0.856	0.328	0.726	0.236	1.051	0.035	orf6.2127;orf6.2126	YIR005W;IST3		YIR005W		2.00E-24	cellular_component unknown;molecular_function unknown;biological_process unknown
Contig4-2749_0007	YIL8	0.994	0.948	0.906	0.656	0.964	0.869	1.320	0.108	0.943	0.471	0.785	0.398	0.562	0.004	0.810	0.190	0.884	0.760	0.872	0.499	0.510	0.090	0.963	0.890	orf6.5549;orf6.616;orf6.5550;orf6.617;YIL8	(-	-	YIL007C		1.00E-22	molecular_function unknown;biological_process unknown
Contig4-2921_0001	RRP7	0.991	0.931	0.835	0.131	0.987	0.881	0.999	0.997	1.004	0.974	0.444	0.005	0.760	0.003	0.946	0.414	0.967	0.870	0.528	0.004	0.441	0.033	0.731	0.113	orf6.6143;orf6.6142;RRP7	involved in rRNA processing; Rrp7p >gi:140365:sp:P25368:YCD1	ribosome assembly	YCL031C	involved in rRNA processing	1.00E-39	cellular_component unknown;molecular_function unknown;35S primary transcript processing;ribosomal small subunit assembly and maintenance
Contig4-2200_0005	orf6.1540	0.992	0.938	1.100	0.580	1.086	0.527	1.066	0.538	1.125	0.488	0.738	0.591	0.651	0.025	0.980	0.915	0.989	0.925	0.558	0.105	0.658	0.140	0.749	0.218	orf6.1540;orf6.293	(AL022244) putative MSF transporter [Schizosaccharomyces pom	phosphate permease	YCR037C	phosphate permease	1.00E-180	transport
Contig4-2730_0010	orf6.5133	0.982	0.907	0.773	0.364	0.739	0.339	0.768	0.341	0.980	0.685	0.538	0.010	0.914	0.415	1.019	0.686	0.994	0.944	0.884	0.284	0.933	0.821	1.245	0.291	orf6.5133;orf6.5134	YOL139C;CDC33	mRNA cap binding protein eIF-4E	YOL139C	mRNA cap binding protein eIF-4E	1.00E-09	cytoplasm;nucleus;ribosome;translation initiation factor;translation initiation factor;cell cycle control;protein synthesis initiation;protein synthesis initiation;protein synthesis initiation
Contig4-3048_0003	orf6.8786	0.974	0.890	0.903	0.373	1.536	0.464	1.428	0.283	0.984	0.694	0.227	0.008	0.310	0.029	0.696	0.059	0.988	0.923	1.898	0.053	1.065	0.755	1.064	0.630	orf6.8786;orf6.8785	YGR204W;ade3	encodes the cytoplasmic trifunctional enzyme C1-tetrahydrofolate synthase	YGR204W	encodes the cytoplasmic trifunctional enzyme C1-tetrahydrofolate synthase	2.00E-99	formate-tetrahydrofolate ligase
Contig4-2602_0009	orf6.3441	0.981	0.903	1.014	0.927	0.893	0.576	0.920	0.673	0.882	0.423	0.516	0.067	0.404	0.015	1.107	0.752	0.975	0.886	0.853	0.592	0.579	0.086	1.097	0.856	orf6.3441						
Contig4-2994_0001	TYE7	0.996	0.956	1.259	0.389	1.917	0.090	2.649	0.070	0.937	0.495	0.841	0.076	0.355	0.007	0.657	0.106	0.995	0.948	0.422	0.001	0.522	0.019	0.637	0.168	orf6.6049;TYE7	Beta-HLH Transcription Factor	glycolytic gene expression	YOR344C	"TYE7, a 33 kDa serine-rich protein, is a potential member of the basic region\/helix-loop-helix\/leucine-zipper protein family"	1.00E-18	glycolysis
Contig4-2394_0002	orf6.3445	0.989	0.927	0.555	0.236	0.632	0.139	0.607	0.420	1.042	0.651	0.656	0.343	0.373	0.015	0.731	0.133	0.988	0.922	0.540	0.136	0.240	0.033	0.490	0.024	orf6.3445;orf6.1613	small nucleolar RNP proteins; Gar1p >gi:120941:sp:P28007:GAR	small nucleolar RNP proteins	YHR089C	small nucleolar RNP proteins	7.00E-48	box H+ACA snoRNP protein;small nuclear ribonucleoprotein;35S primary transcript processing;rRNA modification
Contig4-2596_0001	PWP1	0.992	0.936	0.548	0.355	0.585	0.525	0.953	0.646	1.028	0.507	0.571	0.207	0.476	0.035	1.116	0.375	0.987	0.919	1.094	0.397	0.592	0.097	1.454	0.137	orf6.2368;orf6.2369;PWP1	(Z82274) JC8.2 [Caenorhabditis elegans	periodic tryptophan protein	YLR196W	similar to beta-transducin superfamily	1.00E-166	molecular_function unknown;biological_process unknown
Contig4-2724_0007	orf6.2657	0.998	0.967	1.030	0.714	0.889	0.405	0.670	0.186	1.004	0.783	0.765	0.341	0.636	0.009	0.939	0.678	0.930	0.823	0.452	0.017	0.474	0.020	0.529	0.026	orf6.2657						
Contig4-3088_0036	orf6.6810	0.964	0.862	1.023	0.832	0.910	0.216	0.649	0.122	0.995	0.956	0.488	0.017	0.851	0.364	0.830	0.250	0.968	0.875	0.791	0.292	0.682	0.102	0.686	0.018	orf6.6810	YHR020W	Aminoacyl tRNA-synthetase	YHR020W	Aminoacyl tRNA-synthetase	1.00E-180	cellular_component unknown;proline-tRNA ligase;biological_process unknown
Contig4-3038_0016	NUP2	0.997	0.961	1.097	0.282	1.044	0.358	0.992	0.912	1.034	0.800	0.467	0.025	0.785	0.248	0.912	0.291	0.960	0.862	0.832	0.037	0.780	0.147	0.807	0.111	orf6.6774;orf6.6775;orf6.6773;NUP2	YLR335W;NUP2	nuclear pore subunit	YLR335W	nuclear pore complex protein with central repetitive domain similar to that of NSP1 and NUP1	2.00E-26	nuclear pore;structural protein;NLS-bearing substrate-nucleus import;mRNA-binding (hnRNP) protein-nucleus import;mRNA-nucleus export;nuclear pore organization and biogenesis;protein-nucleus export;rRNA-nucleus export;rRNA-nucleus export;ribosomal protein-nucleus import;snRNA-nucleus export;snRNP protein-nucleus import;tRNA-nucleus export
Contig4-2819_0013	orf6.4071	0.999	0.979	1.018	0.770	0.823	0.387	1.021	0.860	0.970	0.732	0.651	0.131	0.493	0.073	0.574	0.188	0.945	0.830	0.643	0.091	0.609	0.064	0.704	0.031	orf6.4071;orf6.4716						
Contig4-2414_0007	YHR111	0.988	0.923	0.735	0.118	0.823	0.171	0.908	0.690	1.105	0.423	0.522	0.005	0.817	0.100	0.980	0.389	0.996	0.957	0.646	0.068	0.594	0.058	0.780	0.079	orf6.5584;YHR111	(D90914) molybdopterin biosynthesis MoeB protein [Synechocys	molybdopterin biosynthesis	YHR111W	"moeB, thiF, UBA1"	1.00E-106	molecular_function unknown;biological_process unknown
Contig4-3103_0006	FAS1	0.998	0.967	0.790	0.217	0.943	0.613	1.063	0.213	1.104	0.440	0.588	0.006	0.893	0.704	1.022	0.877	0.955	0.848	0.520	0.085	0.739	0.300	1.018	0.944	orf6.8228;FAS1	YKL182W;fas1	fatty acid synthase beta subunit	YKL182W	"pentafunctional enzyme consisting of the following domains : acetyl transferase, enoyl reductase, dehydratase and malonyl\/palmityl transferase"	1.00E-180	cytosol;fatty-acid synthase complex;3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase;[acyl-carrier protein] S-acetyltransferase;[acyl-carrier protein] S-malonyltransferase;enoyl-[acyl-carrier protein] reductase (NADH);fatty acid biosynthesis
Contig4-2343_0002	CDC95	0.974	0.889	0.541	0.044	0.766	0.308	0.887	0.356	1.306	0.424	0.924	0.804	0.543	0.062	1.239	0.222	0.983	0.908	1.006	0.981	0.648	0.264	0.466	0.133	orf6.1128;orf6.1615;CDC95;YPR15	"(AP000815) ESTs C98259(C1345),D15820(C1345) correspond to a"	translation initiation factor 6	YPR016C	Similar to human translation initiation factor 6 (eIF6)	1.00E-128	molecular_function unknown
Contig4-2561_0008	orf6.5900	0.997	0.965	0.895	0.296	0.902	0.591	1.110	0.182	1.058	0.438	0.885	0.048	0.595	0.006	0.904	0.030	0.996	0.954	0.744	0.191	0.774	0.447	0.799	0.457	orf6.5900	YPL199C		YPL199C		7.00E-17	molecular_function unknown;biological_process unknown
Contig4-2870_0002	orf6.1317	0.982	0.908	1.178	0.185	1.062	0.610	1.169	0.054	1.063	0.425	0.834	0.152	0.527	0.103	0.862	0.056	0.948	0.836	0.977	0.899	1.086	0.779	0.956	0.691	orf6.1317;orf6.