| Reference | Literature Topic | Species | Genes Addressed |
|---|
Arribas V, et al. (2024) Unravelling the Role of Candida albicans Prn1 in the Oxidative Stress Response through a Proteomics Approach. Antioxidants (Basel) 13(5)
  | Large-scale protein detection | C. albicans | |C1_00700W_A |CR_09140C_A |CUB1 |MNL1 |NRG1 |PRN1 |QCR9 |
Avelar GM, et al. (2024) A CO(2) sensing module modulates beta-1,3-glucan exposure in Candida albicans. MBio :e0189823
  | Genomic expression study | C. albicans | |NCE103 |PHO84 |RCA1 |SCH9 |XOG1 |
Bergin S, et al. (2024) Analysis of clinical Candida parapsilosis isolates reveals copy number variation in key fluconazole resistance genes. Antimicrob Agents Chemother :e0161923
| Genomic expression study | C. parapsilosis | |CDR1 |CDR1B |ERG11 |MDR1 |MDR1B |MRR1 |
Bregon-Villahoz M, et al. (2024) Candida albicans cDNA library screening reveals novel potential diagnostic targets for invasive candidiasis. Diagn Microbiol Infect Dis 109(3):116311
| Other large-scale proteomic analysis | C. albicans | |APE2 |CYS3 |ENO1 |HYR1 |SEC21 |
Chow EWL, et al. (2024) Genome-wide profiling of piggyBac transposon insertion mutants reveals loss of the F(1) F(0) ATPase complex causes fluconazole resistance in Candida glabrata. Mol Microbiol
| Genomic expression study, Large-scale phenotype analysis | C. glabrata | |ATP22 |ATP3 |CDR1 |PDH1 |PDR1 |SNQ2 |
Dunaiski CM, et al. (2024) Molecular epidemiology and antimicrobial resistance of vaginal Candida glabrata isolates in Namibia. Med Mycol
| Other genomic analysis | C. glabrata | |CDR1 |ERG6 |ERG7 |FKS1 |FKS2 |FPS1 |MSH2 |PDR1 |SNQ2 |
Gavandi T, et al. (2024) MIG1, TUP1 and NRG1 mediated yeast to hyphal morphogenesis inhibition in Candida albicans by ganciclovir. Braz J Microbiol
| Genomic expression study | C. albicans | |MIG1 |NRG1 |TUP1 |
Hefny ZA, et al. (2024) Transcriptomic meta-analysis to identify potential antifungal targets in Candida albicans. BMC Microbiol 24(1):66
| Genomic expression study | C. albicans | |C3_06710W_A |C4_01950W_A |C7_03400C_A |GLC7 |PRA1 |RIM101 |RIM21 |RSP5 |SAP4 |SAP6 |SOD1 |SOD2 |SOD3 |SOD4 |MORE |
Jaeger M, et al. (2024) Alpha1-antitrypsin impacts innate host-pathogen interactions with Candida albicans by stimulating fungal filamentation. Virulence :2333367
| Genomic expression study | C. albicans | |C2_05670C_A |CPH1 |CR_06090W_A |CR_07910C_A |ECE1 |EFG1 |HOC1 |MKC1 |OCH1 |SET3 |TCC1 |TUP1 |
Kumar K, et al. (2024) SWI/SNF complex-mediated chromatin remodeling in Candida glabrata promotes immune evasion. iScience 27(4):109607
| Other genomic analysis, Genomic expression study | C. glabrata | |BMT2 |CHD1 |EPA1 |INO80 |ISW1 |ISW2 |SNF2 |SNF5 |SNF6 |STH1 |SWR1 |
Misas E, et al. (2024) Genomic description of acquired fluconazole- and echinocandin-resistance in patients with serial Candida glabrata isolates. J Clin Microbiol :e0114023
| Other genomic analysis | C. glabrata | |FKS1 |FKS2 |PDR1 |
Pavesic MW, et al. (2024) Calcineurin-dependent contributions to fitness in the opportunistic pathogen Candida glabrata. mSphere 9(1):e0055423
| Large-scale phenotype analysis | C. glabrata | |ALG5 |ALG6 |ALG8 |APL2 |APS1 |ARF1 |CNB1 |CRZ1 |DCW1 |FKS1 |FLC2 |INP53 |LAS21 |PDR1 |MORE |
Rai LS, et al. (2024) Metabolic reprogramming during Candida albicans planktonic-biofilm transition is modulated by the transcription factors Zcf15 and Zcf26. PLoS Biol 22(6):e3002693
| Other genomic analysis, Genomic expression study | C. albicans | |C1_02850W_A |C3_01800C_A |C3_04730C_A |C3_07460W_A |C4_02190C_A |C7_03830C_A |CBF1 |CR_02460W_A |ECE1 |GAL7 |HWP1 |HYR1 |INO1 |RBF1 |MORE |
Sprague JL, et al. (2024) Candida albicans translocation through the intestinal epithelial barrier is promoted by fungal zinc acquisition and limited by NFkappaB-mediated barrier protection. PLoS Pathog 20(3):e1012031
| Genomic expression study | C. albicans | |ECE1 |PRA1 |ZRC1 |ZRT101 |ZRT2 |ZRT3 |
Teng W, et al. (2024) Heat Shock Protein SSA1 Enriched in Hypoxic Secretome of Candida albicans Exerts an Immunomodulatory Effect via Regulating Macrophage Function. Cells 13(2)
| Large-scale protein detection | C. albicans | |HSP70 |
Wakade RS, et al. (2024) Temporal dynamics of Candida albicans morphogenesis and gene expression reveals distinctions between in vitro and in vivo filamentation. mSphere :e0011024
| Genomic expression study | C. albicans | |BRG1 |CPH1 |CPH2 |ECE1 |EFG1 |HYR1 |IHD1 |NRG1 |PES1 |TEC1 |UME6 |YWP1 |
Wang Y and Xu J (2024) Associations between Genomic Variants and Antifungal Susceptibilities in the Archived Global Candida auris Population. J Fungi (Basel) 10(1)
| Other genomic analysis | C. auris | |ERG11 |FKS1 |
Xiong L, et al. (2024) Regulatory features of Candida albicans hemin-induced filamentation. G3 (Bethesda)
| Genomic expression study | C. albicans | |BRG1 |CFL4 |CSA2 |EFG1 |FRE10 |FTR1 |HMX1 |PGA10 |PGA7 |RBT5 |RIM101 |YWP1 |ZCF20 |
Xu Y, et al. (2024) The rod cell, a small form of Candida albicans, possesses superior fitness to the host gut and adaptation to commensalism. Acta Biochim Biophys Sin (Shanghai)
| Genomic expression study | C. albicans | |CPH1 |CSA2 |CWP419 |EFG1 |HSP31 |LIP9 |NGS1 |OP4 |PGA26 |WH11 |WOR1 |
Zhang Y, et al. (2024) DNA Damage Checkpoints Govern Global Gene Transcription and Exhibit Species-Specific Regulation on HOF1 in Candida albicans. J Fungi (Basel) 10(6)
| Genomic expression study | C. albicans | |DUN1 |FKH2 |HMX1 |HOF1 |MCM1 |MRV6 |RAD53 |RAD9 |
Zhu X, et al. (2024) Mitochondrial Protease Oct1p Regulates Mitochondrial Homeostasis and Influences Pathogenicity through Affecting Hyphal Growth and Biofilm Formation Activities in Candida albicans. J Fungi (Basel) 10(6)
| Genomic expression study | C. albicans | |ALS1 |ALS3 |ECE1 |FTR1 |HWP1 |MP65 |OCT1 |RBT5 |
Abdulghani M, et al. (2023) Opaque Cell Specific Proteome of Candida albicans ATCC 10231. Med Mycol
| Other large-scale proteomic analysis | C. albicans | |AGE3 |ALS1 |ATP1 |ATP16 |ATP3 |ATP7 |CCP1 |CCS1 |COX6 |CSH1 |GCS1 |GPX2 |GPX3 |GTT11 |MORE |
Alam F, et al. (2023) Pseudomonas aeruginosa increases the susceptibility of Candida albicans to amphotericin B in dual-species biofilms. J Antimicrob Chemother
| Genomic expression study | C. albicans | |CAP1 |ERG6 |SOD2 |UPC2 |
Alings F, et al. (2023) Ncs2* mediates in vivo virulence of pathogenic yeast through sulphur modification of cytoplasmic transfer RNA. Nucleic Acids Res
| Genomic expression study | C. albicans | |NCS2 |tE(UUC)1 |tE(UUC)2 |tE(UUC)3 |tE(UUC)4 |tE(UUC)5 |tE(UUC)6 |tE(UUC)7 |tK(UUU)1 |tK(UUU)2 |tK(UUU)3 |tK(UUU)4 |tK(UUU)5 |
Balla N, et al. (2023) Total transcriptome analysis of Candida auris planktonic cells exposed to tyrosol. AMB Express 13(1):81
| Genomic expression study | C. auris | |CAP1 |HSP78 |SOD4 |
Ben Abid F, et al. (2023) Molecular characterization of Candida auris outbreak isolates in Qatar from COVID-19 patients reveals the emergence of isolates resistant to three classes of antifungal drugs. Clin Microbiol Infect
| Other genomic analysis | C. auris | |CDR1 |CDR2 |CIS2 |ERG11 |ERG3 |ERG4 |ERG5 |FKS1 |SNQ2 |STE6 |TAC1b |
Brandt P, et al. (2023) High-Throughput Profiling of Candida auris Isolates Reveals Clade-Specific Metabolic Differences. Microbiol Spectr :e0049823
| Genomic expression study, Large-scale phenotype analysis | C. auris | |B9J08_002974 |B9J08_003830 |B9J08_004062 |B9J08_004066 |B9J08_004188 |B9J08_004204 |B9J08_004243 |B9J08_004448 |B9J08_004538 |B9J08_004560 |B9J08_004893 |B9J08_005124 |B9J08_005570 |B9J08_005571 |MORE |
| | C. albicans | |JEN1 |JEN2 |TNA1 |
Case NT, et al. (2023) Respiration supports intraphagosomal filamentation and escape of Candida albicans from macrophages. mBio :e0274523
| Large-scale phenotype analysis | C. albicans | |COR1 |MRP21 |SNF1 |
Chow EWL, et al. (2023) The transcription factor Rpn4 activates its own transcription and induces efflux pump expression to confer fluconazole resistance in Candida auris. MBio :e0268823
| Genomic expression study | C. auris | |CDR1 |MDR1 |MUB1 |RPN4 |UBR2 |
Cravener MV, et al. (2023) Reinforcement amid genetic diversity in the Candida albicans biofilm regulatory network. PLoS Pathog 19(1):e1011109
| Genomic expression study | C. albicans | |BRG1 |C2_05770W_A |EFG1 |RFX2 |UME6 |WOR3 |
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