| Reference | Literature Topic | Species | Genes Addressed |
|---|
Dhamgaye S, et al. (2012) In Vitro Effect of Malachite Green on Candida albicans Involves Multiple Pathways and Transcriptional Regulators UPC2 and STP2. Antimicrob Agents Chemother 56(1):495-506
   | Genomic expression study | C. albicans | |ABP1 |ALS1 |ATM1 |CAT1 |CDR1 |COX13 |CTR1 |ENO1 |FET3 |FTR1 |GPX2 |HSP104 |HSP70 |ILV5 |MORE |
Nobile CJ, et al. (2012) A Recently Evolved Transcriptional Network Controls Biofilm Development in Candida albicans. Cell 148(1-2):126-38
| Genomic co-immunoprecipitation study | C. albicans | |ALS1 |BCR1 |BRG1 |CAN2 |EFG1 |EHT1 |GRF10 |HWP1 |HYR1 |NDT80 |ROB1 |TEC1 |TPO4 |orf19.3337 |
Prasad TS, et al. (2012) Proteogenomic Analysis of Candida glabrata using High Resolution Mass Spectrometry. J Proteome Res 11(1):247-60
| Large-scale protein detection | C. glabrata | |ASC1 |CAGL0G01892g |CAGL0G03575g |CAGL0G04213g |CAGL0H03267g |CAGL0H10472g |CAGL0I00264g |CAGL0I11011g |CAGL0L00517g |ILV5 |
Askew C, et al. (2011) The zinc cluster transcription factor Ahr1p directs Mcm1p regulation of Candida albicans adhesion. Mol Microbiol 79(4):940-53
| Genomic co-immunoprecipitation study, Genomic expression study | C. albicans | |AHR1 |MCM1 |
Bharucha N, et al. (2011) A Large-Scale Complex Haploinsufficiency-Based Genetic Interaction Screen in Candida albicans: Analysis of the RAM Network during Morphogenesis. PLoS Genet 7(4):e1002058
| Large-scale genetic interaction | C. albicans | |ACE2 |ACT1 |ADE4 |ADH1 |ATP3 |CBK1 |CCC1 |CCT7 |CDH1 |COX8 |EFG1 |ENO1 |GPD2 |HGT6 |MORE |
Bharucha N, et al. (2011) A large-scale complex haploinsufficiency-based genetic interaction screen in Candida albicans: Analysis of the RAM network during morphogenesis. PLoS Genet 7(4):e1002058
| Large-scale genetic interaction | C. albicans | |ACE2 |ACT1 |ADH1 |CBK1 |EFG1 |ENO1 |HGT6 |RGD3 |TPK1 |TPK2 |
Bonhomme J, et al. (2011) Contribution of the glycolytic flux and hypoxia adaptation to efficient biofilm formation by Candida albicans. Mol Microbiol 80(4):995-1013
| Genomic expression study | C. albicans | |AAF1 |ABC1 |ACS1 |ADH1 |ADH5 |ADK1 |AHP1 |ALP1 |ALS3 |AMS1 |AQY1 |ARE2 |ARG1 |ARG4 |MORE |
Brena S, et al. (2011) Fungicidal monoclonal antibody C7 interferes with iron acquisition in Candida albicans. Antimicrob Agents Chemother 55(7):3156-63
| Genomic expression study | C. albicans | |CCC2 |CSH1 |CTR1 |CYB5 |CYT1 |FET34 |FTR1 |FTR2 |IDP2 |IFD6 |PCK1 |SDH12 |SIT1 |SOD5 |
Caudle KE, et al. (2011) Genomewide expression profile analysis of the Candida glabrata Pdr1 regulon. Eukaryot Cell 10(3):373-83
| Genomic expression study | C. glabrata | |ATF2 |CAGL0A01001g |CAGL0A02134g |CAGL0A02673g |CAGL0A02882g |CAGL0A03608g |CAGL0A04323g |CAGL0A04697g |CAGL0A04807g |CAGL0C01749g |CAGL0C03916g |CAGL0E00649g |CAGL0E01441g |CAGL0E01617g |MORE |
Chaudhuri R, et al. (2011) FungalRV: adhesin prediction and immunoinformatics portal for human fungal pathogens. BMC Genomics 12:192
| Other genomic analysis, Computational analysis | C. glabrata | |AED1 |AWP2 |AWP3 |AWP6 |AWP7 |CAGL0C00253g |CAGL0C00968g |CAGL0C01133g |CAGL0C03575g |CAGL0D06226g |CAGL0E00187g |CAGL0E00231g |CAGL0E01661g |CAGL0E02915g |MORE |
| | C. albicans | |AAF1 |ADH1 |ALS1 |ALS2 |ALS4 |ALS5 |ALS6 |ALS9 |ASR1 |CHT2 |CHT3 |CUP1 |DDR48 |DTD2 |MORE |
Chen C, et al. (2011) An Iron Homeostasis Regulatory Circuit with Reciprocal Roles in Candida albicans Commensalism and Pathogenesis. Cell Host Microbe 10(2):118-35
| Genomic co-immunoprecipitation study, Genomic expression study | C. albicans | |AAT1 |ACO1 |AFG1 |AGP2 |ATM1 |ATS1 |BMT9 |CAT1 |CCC1 |CCC2 |CCP1 |CFL1 |CFL2 |CFL4 |MORE |
Dagley MJ, et al. (2011) Cell wall integrity is linked to mitochondria and phospholipid homeostasis in Candida albicans through the activity of the post-transcriptional regulator Ccr4-Pop2. Mol Microbiol 79(4):968-989
| Genomic expression study | C. albicans | |CCR4 |POP2 |
Edskes HK, et al. (2011) Prion-forming ability of ure2 of yeasts is not evolutionarily conserved. Genetics 188(1):81-90
| Genomic expression study | C. glabrata | |ADE2 |ADI1 |AHP1 |APT1 |ARG1 |ARG8 |BAT2 |CAGL0A00341g |CAGL0A01221g |CAGL0A01606g |CAGL0A01650g |CAGL0A01716g |CAGL0A02002g |CAGL0A02321g |MORE |
| | C. albicans | |AFP99 |AMO1 |AMO2 |ARG3 |ARG8 |CAN1 |CAN2 |CFL2 |CPA1 |CPA2 |DAL1 |DDR48 |DIP5 |DLD2 |MORE |
Ferrari S, et al. (2011) Contribution of CgPDR1-regulated genes in enhanced virulence of azole-resistant Candida glabrata. PLoS One 6(3):e17589
| Genomic expression study | C. glabrata | |CAGL0G01122g |CAGL0K09702g |CDR1 |PDH1 |PDR1 |PUP1 |RTA1 |YBT1 |YOR1 |
Ferrari S, et al. (2011) Loss of mitochondrial functions associated with azole resistance in Candida glabrata results in enhanced virulence in mice. Antimicrob Agents Chemother 55(5):1852-60
| Genomic expression study | C. glabrata | |ATP1 |ATP6 |ATP9 |CAGL0B03421g |CAGL0D04356g |CAGL0D05434g |CAGL0D06006g |CAGL0F01749g |CAGL0F04719g |CAGL0G02717g |CAGL0I06809g |CAGL0K12540g |CDR1 |COX1 |MORE |
Forche A, et al. (2011) Stress alters rates and types of loss of heterozygosity in Candida albicans. MBio 2(4)
| Other genomic analysis |
Goudot C, et al. (2011) The Reconstruction of Condition-Specific Transcriptional Modules Provides New Insights in the Evolution of Yeast AP-1 Proteins. PLoS One 6(6):e20924
| Computational analysis | C. albicans | |CAP1 |
| | C. glabrata | |AP1 |
Hameed S, et al. (2011) Calcineurin Signaling and Membrane Lipid Homeostasis Regulates Iron Mediated MultiDrug Resistance Mechanisms in Candida albicans. PLoS One 6(4):e18684
| Genomic expression study | C. albicans | |AGE3 |AUR1 |BCK1 |CMP1 |CNB1 |CRZ1 |ERG1 |ERG11 |ERG2 |ERG25 |HSP90 |MKC1 |PKC1 |RHR2 |MORE |
Heilmann CJ, et al. (2011) Hyphal induction in the human fungal pathogen Candida albicans reveals a characteristic wall protein profile. Microbiology 157(Pt 8):2297-307
| Large-scale protein detection | C. albicans | |ALS1 |ALS2 |ALS3 |ALS4 |CHT2 |CRH11 |ECM33 |HWP2 |HYR1 |MP65 |PGA4 |PHR1 |PHR2 |PIR1 |MORE |
Hussein B, et al. (2011) G1/S transcription factor orthologues Swi4p and Swi6p are important but not essential for cell proliferation and influence hyphal development in the fungal pathogen Candida albicans. Eukaryot Cell 10(3):384-97
| Genomic expression study | C. albicans | |ASE1 |CDC6 |CLN3 |DUT1 |FKH2 |GIN4 |HCM1 |HHO1 |HTA3 |MBP1 |MCD1 |MCM1 |MLH1 |NAT4 |MORE |
Klis FM, et al. (2011) A mass spectrometric view of the fungal wall proteome. Future Microbiol 6:941-51
| Large-scale protein detection | C. albicans | |ALS1 |ALS2 |ALS3 |ALS4 |ALS5 |ALS6 |ALS7 |ALS9 |CRH11 |CRH12 |CSA1 |ECM33 |ECM331 |HYR1 |MORE |
Komatsu T, et al. (2011) Influence of histatin 5 on Candida albicans mitochondrial protein expression assessed by quantitative mass spectrometry. J Proteome Res 10(2):646-55
| Large-scale protein detection |
Lassak T, et al. (2011) Target specificity of the Candida albicans Efg1 regulator. Mol Microbiol 82(3):602-18
| Genomic co-immunoprecipitation study | C. albicans | |CZF1 |DEF1 |EFG1 |FGR17 |NRG1 |RFG1 |TCC1 |TEC1 |TPK2 |WOR1 |WOR2 |
Leach MD, et al. (2011) Identification of sumoylation targets, combined with inactivation of SMT3, reveals the impact of sumoylation upon growth, morphology, and stress resistance in the pathogen Candida albicans. Mol Biol Cell 22(5):687-702
| Large-scale protein modification | C. albicans | |ADE5,7 |ADO1 |ATP1 |ATP16 |CAR1 |CCT7 |CEK1 |DOT5 |ERG13 |HSP104 |HSP60 |IPP1 |LAT1 |LSP1 |MORE |
Liang RM, et al. (2011) 2-Amino-nonyl-6-methoxyl-tetralin muriate activity against Candida albicans augments endogenous reactive oxygen species production - a microarray analysis study. FEBS J 278(7):1075-85
| Genomic expression study | C. albicans | |ADH1 |ADH3 |ADH5 |ALD5 |CDC19 |CYT1 |GPX1 |GPX2 |HXK2 |PDC11 |PFK1 |PFK2 |QCR2 |QCR8 |MORE |
Lin Z and Li WH (2011) The Evolution of Aerobic Fermentation in Schizosaccharomyces pombe Was Associated with Regulatory Reprogramming but not Nucleosome Reorganization. Mol Biol Evol 28(4):1407-13
| Genomic expression study |
Mishra PK, et al. (2011) DNA methylation regulates phenotype-dependent transcriptional activity in Candida albicans. Proc Natl Acad Sci U S A 108(29):11965-70
| Other genomic analysis | C. albicans | |ARH2 |BCR1 |BIO2 |BUD2 |BUD6 |CAG1 |CARE1 |CCT3 |CDC19 |CDC46 |CDC60 |CEK1 |CSC25 |DOT1 |MORE |
Monteoliva L, et al. (2011) Quantitative Proteome and Acidic Subproteome Profiling of Candida albicans Yeast-to-Hypha Transition. J Proteome Res 10(2):502-17
| Large-scale protein detection | C. albicans | |AAT1 |ACO1 |ACT1 |ADE1 |ADE17 |ADE5,7 |ADE6 |ADH1 |ADO1 |AHP1 |ANB1 |APE2 |APT1 |ARA1 |MORE |
Roetzer A, et al. (2011) Regulation of Candida glabrata oxidative stress resistance is adapted to host environment. FEBS Lett 585(2):319-27
| Genomic expression study | C. glabrata | |ACP1 |ADI1 |AHP1 |ALD4 |AP1 |APQ12 |AQY1 |BNA3 |CAGL0F08767g |CAGL0G06402g |CAGL0G07271g |CAGL0I02574g |CAGL0K12958g |CAGL0M13541g |MORE |
Rossignol T, et al. (2011) Endocytosis-Mediated Vacuolar Accumulation of the Human ApoE Apolipoprotein-Derived ApoEdpL-W Antimicrobial Peptide Contributes to Its Antifungal Activity in Candida albicans. Antimicrob Agents Chemother 55(10):4670-81
| Genomic expression study | C. albicans | |CAN1 |GAP1 |GAP6 |GNP1 |MYO5 |PTR2 |RTA2 |SSA2 |orf19.4940 |
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